Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1072 |
Symbol | |
ID | 2740833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 1100881 |
End bp | 1103496 |
Gene Length | 2616 bp |
Protein Length | 871 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637159946 |
Product | putative lipoprotein |
Protein accession | NP_971680 |
Protein GI | 42526582 |
COG category | [R] General function prediction only |
COG ID | [COG3889] Predicted solute binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000214841 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGTT TTGTTAAGTT TTTAGCATGT ATGCTTGCAG TGGCTTTGGT ATTTACTGCA TGCGGAGGCG GTGCCGGAAC TGCCGCAGGA GGCAAAAGCC CTGTAAAGAA CGGTACCTAT GTAGATAAGG TTATCTACTC CGTAAGTACC GATCAGACCG TTGCCTTAAA AGATGTTATT GAGGGAAAGG TAGACCTTAT GTTTACCTCT GTTCCGCCCG TACTTTTGTC GGGTTTGAGC GATGAAGACA GAGATAAGAT AGATGTTTAT CCTGTTCCTA CAGGTTATTG GTCTCTTCTA TTTAACCCTA TCCCCAACAA GGCTCCCTAT GTTTGGAAGA CGGAAGCCGG AGAGGAAATG TTTAACCCCG TTGCCATCAA GGAAGTCCGC TATGCCTTTA ACTGGTTAAT CAACCGAAAA AAATTGGTAG ATGAACTCCT TTTAGGTGAA GGTTCTCCTA TGTATACGCC ATGTACCGTA GGTCTTCCCG GAGCATACCG CTATAATATC TTGGCTTCCA AATTCGGTAT CACCGAAACC GGAGATGAGC AAAAAGCTAT CAGCATGATT GAAAATGCTA TGCAAAAGGC TTCTCAACTT GCCGAAAACA AGGGAAAACT TGTAAAAGAA AACGGAAAGT GGATGTACAA GGGCAAGCCC GTTACAATCA AGTCCATAAT GCGTGTTGAC GATCCTACAG GCCGTCTTCC TGCAGCCCGC TATATTCATG CTCAAATCGA AAAAGCCGGT CTTACGGTTG AAGGTTTTGA ACGAGATAGA AAAACAGCCG GAAGTCTTGT TTACGGCGGA AACCCTGCCA ACTATGATTG GACCATGTAC CTTGAAGGAT GGGGTTCAGG CGGTTTCTAT GTAACATGGG AAACTCCTCT TTGCCAGATG TACAGCCCCT TCTACGGCTA CATGCCGGGA GGCGGAGAGG CCGAATTCTG GAATTATTCA AACGAAAAAT TAGATGTTTT AGGTAAAAAG GCTGCCTACG GACAGTATTT GACTGCCGAA GAATTCTTTA GCGAAACAAC CGATATGTGT GCTATAGGAA TGGGAGAAGC TGTCCGTGTT TATGTTGTTT CTCAAAACGA TTTATATGTA GCCAACAGAG GAAGATTTAA TTCACGTCTT TTCTATGGAA CCTCTGACGG CTTTAACGGC TGGACCGTAA GATGTGCCGA TGTTAAGCCC GATACAGACG GCCCCTATAA AGGAAAGAGG GTCTTGCGTG TATTGCAGTA TTCAGCTCAA GGCTCCTTAT TTATGTCTGA ATGGGATCCT GTAGGCGGAC AGGGCTTTAG TGATGCCTAT AGTACTGCCT TTTTTAATGC CGTTACCGAT AGAGCTTCCT TTGATAACCC TGCCGTAGGA CGATTGGAAT TTGCTATGTC AACGGTTGAT GTTGCAAATA CAAAATTCGC TCCCAAATTC GTACCCACAG GCAACAAGAC AGAGGAAGGC GATGATGAAC TTGCAATGGG CGGTGATATT CCCGTTCCTG CAGAAGCCGT TATGTATGAC ACAGCTTCAA AAAAATGGGT TCCTGCCGAG TCAGGTCAAA GTGTTGCAAC TGTTGCAACG GGTAAGCTCG TAGACGGTTA TTACTGGCAT CACGGCGAAC CTGTCGATCT TAACGATGTC AGGTATGCCT TTGCCTTTGC TTATGAGTGG GCTATTCAAG ACGGAGAGGG AGACCTCTAC TATGATGCTC CTTTAAGCAG TGTAACTCTT CCAAGTCTTA AAACCACAAA AGGTATAGTA TTTAATAAGG ATGGATCCAT AACTACATAC AGTAACTACT TCCATGCTCC TATCCCAAGA GATACAGCTA TAACTGTAGG CGGTTTAAGC GTAAAGGCTG CTAACCCCGG ACGACGAACA AATGTACCTT GGGAAATTTA TGAAGCCTTG GCAGAAATGG TAGTACACGG CTCAAAGAGC GGAACGGTTT ATAACTTTGC TAAAGACGGC GGAGAGCGCG GTGTAGAAGC AAATGTTAAA AACCCCGATT GTCTTGCAGA TATCAAGGCT AAATTGGAAG ATTTTGTTGC TTCAAAGCAT ATTCCTGTGT CTTTAAAGGA TTTTATAAAT GAAGATTACG CCATTAAGAG ATACAAGGCT TCTATAGCCT TTATCGAAAA ATACGGAAAT GCTTATATTA CAACAGGTCC TTTAATGTTC GAAAAAATAG ATCCTGTTAC AAGCTCCGTC GTATTGGCTA ACTTCGATAA GTATCCTTAT AAGAGCGACT ACTTCCCGAA TATGTTTAAA ACAGATCTTA CTGAGATTCA GTATGTCAAG GCTCCTGTAG CTCCTTCGGC AGACAAGGAT GCCGTATTTG AGGTAACCGT TTCCAAGTAT GCTTATCCTG AGGTTGAAAG AGTCCCTCTC GATAAGGGAA AGGTTGAAGG ACGTCTCCAG CTTCCTTCAG GCGGAGAGAA GACTTATGAT GCTAAAGCAA TAGGTGACGG TAAATTCACT ATTACCGTAC CTGCATCAGA CTTAGCCGGA CTTGAAAAAG GCGTGGAATA TATAATGGTT GTATTAACCT CAATTTCCGA TGAGCCGCCC TCAGCAAATT CGGTAAGCTT TACAATTCTT AAATAG
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Protein sequence | MKSFVKFLAC MLAVALVFTA CGGGAGTAAG GKSPVKNGTY VDKVIYSVST DQTVALKDVI EGKVDLMFTS VPPVLLSGLS DEDRDKIDVY PVPTGYWSLL FNPIPNKAPY VWKTEAGEEM FNPVAIKEVR YAFNWLINRK KLVDELLLGE GSPMYTPCTV GLPGAYRYNI LASKFGITET GDEQKAISMI ENAMQKASQL AENKGKLVKE NGKWMYKGKP VTIKSIMRVD DPTGRLPAAR YIHAQIEKAG LTVEGFERDR KTAGSLVYGG NPANYDWTMY LEGWGSGGFY VTWETPLCQM YSPFYGYMPG GGEAEFWNYS NEKLDVLGKK AAYGQYLTAE EFFSETTDMC AIGMGEAVRV YVVSQNDLYV ANRGRFNSRL FYGTSDGFNG WTVRCADVKP DTDGPYKGKR VLRVLQYSAQ GSLFMSEWDP VGGQGFSDAY STAFFNAVTD RASFDNPAVG RLEFAMSTVD VANTKFAPKF VPTGNKTEEG DDELAMGGDI PVPAEAVMYD TASKKWVPAE SGQSVATVAT GKLVDGYYWH HGEPVDLNDV RYAFAFAYEW AIQDGEGDLY YDAPLSSVTL PSLKTTKGIV FNKDGSITTY SNYFHAPIPR DTAITVGGLS VKAANPGRRT NVPWEIYEAL AEMVVHGSKS GTVYNFAKDG GERGVEANVK NPDCLADIKA KLEDFVASKH IPVSLKDFIN EDYAIKRYKA SIAFIEKYGN AYITTGPLMF EKIDPVTSSV VLANFDKYPY KSDYFPNMFK TDLTEIQYVK APVAPSADKD AVFEVTVSKY AYPEVERVPL DKGKVEGRLQ LPSGGEKTYD AKAIGDGKFT ITVPASDLAG LEKGVEYIMV VLTSISDEPP SANSVSFTIL K
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