| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1071 |
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| Symbol | oppA |
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| ID | 2740832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1098903 |
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| End bp | 1100678 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637159945 |
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| Product | peptide ABC transporter, peptide-binding protein OppA |
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| Protein accession | NP_971679 |
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| Protein GI | 42526581 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000408917 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAA TTATGGTGCT AATTGTAACA TTGGTGCTCG CTTTTTCCTT GATCGCATGC
GGAGGAAACG GTGCAGCAAC TAAGACAAAC GAAAAGCCAT TCGTTGTAGC TTCAGCAGAG
TTTAACGGCG ACTTTTACAG AGGCTGGACG AATTCGTCTT ATGACGACGA TATCCGGAAG
TTGATTTGGG CATTCGGTCT TATGAACGAA AATTCCAAAG GTCAAGTTGA GGACTCTCTT
CTCATTGCAG AAAAAAAGGT AAGCGATGAC CTTAAAACAT GGACATTTAA GCTTGTAAAA
GAAGCAAAAT TCCATAACGG TGAAGCTTTA ACTGCAAAGG ATGTAAAGTT TACCTATGAC
TTTTACATGG ACACAAAAGC TTTAGGCGAT ACGGGCGGAT CATCAACAAT CAACGATTAT
GTTGAAAGTA TTGAAATTGA TGAAGCTGCA AATACCGTAA CTTTCCATCT TAAAAAGGTC
AGCTACACTG TTGACGTAGA TGTATTCACT CCTTTTTACC TCTTTCCCGA AGAAACCTTC
ACAAAGGGTG CAAAGGAAGA AGGCATTACC GTACAGCAAT ATGTTAAAAA GAACATTTCA
AAGCCCATCG GTTACGGTCC CTACAAGATG ACCGAATACA AGGAAGGCGA ATATGTTAAG
TTGGAAGCCT TTAAAGACTA CCTCGGTAAG GCACCTGCCA TCAAAGAGGT AATCGTTAAG
GTTGTTCCCA GCGAAACCGA ACTTGACCAG CTCCTTCAGG GTGAAGTAGA CATGCTGACA
AGCCAAGGTC AAGCCGAAAA AATCGATCCC GTTAAAGATA AGCCCGGCTT TTCTTACACC
AATTACTACA GGCACGGAGG AGGAACAATC GCCCTCCACT GTAACTTCGG TCCCACTTCT
CTTACGGAAG TACGACAGGC CTTTGCCTAT GTTCTTAACA GACCGAAAAT CGTCGAGCTT
TTCTTAGGTC AATACGGTAT TTCTTCCAAC GGCCCCTACT CCAAAAACGA CTGGACATTG
TGGGATGATG ATGAAGAAAG CCTTATTGGA ACAGCTGCCG TAGGTAAATT CGAAAGCACC
TTGACAAGCT ACGATATCTT AGATAAAGAC GGAAAATTCG ATGAAGCTGC AAATATTGCA
AAAGCTCAGG AACTCCTTGA TAAAGCAGCT GCAAGAACAG ACGGAGATTA TGCAAAACTT
ACAGGTAATG CAAAATCAGG TTATCTTTGG GAAGGAAAAC CCCTTGAAAT CAAGATTACT
TACACACCTT TCTGGTCCGA TACATATAAC CTCGTATTCA ATGATACTTA TGTTTCAAAG
CTCGGCTTTA AGATAAGTTT AACAGGTCTT GATTGGCCCG TAATGTACAG CCACTGGACA
GGAGACACAA AAGAAGAAAG AACCTATCAT GCTTTCGTAG GCGGTACAAC TTATACACTC
AAAGCCAATC CCAAATCCGA CTACGCAACA AAGCTTATTA AACCTTGGGG ACAGCCCTCT
ATCAACAACG TAATGTTCTC GGGAGGTTCT TCTTATACTC CTGCAGAATG GGATCAGCTG
CTTGATGACA TCGAAAATGC ACATCCCGTA ACAGGAAGAA ATGAGTACAG GAAAAACTGG
AGAAAATTCA TAACAACTAT AAATAAAGAA CTTCCCGTTA TCCCTGTTTA CTCAAACAAT
TACTATGACC TCTTTACGGA TAAATTGGAA AACTTCCATA CTACAGCTTT GTGGAACTGG
GCAAGAGCTT TACCCGAAGC AAATTGGAAA AAATAA
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| Protein sequence | MKKIMVLIVT LVLAFSLIAC GGNGAATKTN EKPFVVASAE FNGDFYRGWT NSSYDDDIRK
LIWAFGLMNE NSKGQVEDSL LIAEKKVSDD LKTWTFKLVK EAKFHNGEAL TAKDVKFTYD
FYMDTKALGD TGGSSTINDY VESIEIDEAA NTVTFHLKKV SYTVDVDVFT PFYLFPEETF
TKGAKEEGIT VQQYVKKNIS KPIGYGPYKM TEYKEGEYVK LEAFKDYLGK APAIKEVIVK
VVPSETELDQ LLQGEVDMLT SQGQAEKIDP VKDKPGFSYT NYYRHGGGTI ALHCNFGPTS
LTEVRQAFAY VLNRPKIVEL FLGQYGISSN GPYSKNDWTL WDDDEESLIG TAAVGKFEST
LTSYDILDKD GKFDEAANIA KAQELLDKAA ARTDGDYAKL TGNAKSGYLW EGKPLEIKIT
YTPFWSDTYN LVFNDTYVSK LGFKISLTGL DWPVMYSHWT GDTKEERTYH AFVGGTTYTL
KANPKSDYAT KLIKPWGQPS INNVMFSGGS SYTPAEWDQL LDDIENAHPV TGRNEYRKNW
RKFITTINKE LPVIPVYSNN YYDLFTDKLE NFHTTALWNW ARALPEANWK K
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