Gene TDE1043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1043 
Symbol 
ID2741317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp1071085 
End bp1072218 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content36% 
IMG OID637159916 
Producthypothetical protein 
Protein accessionNP_971651 
Protein GI42526553 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0296445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGGTC TGTCGTTTAA TCATAAAACA ATCTTTGTAT ATGTTTTTAA AGAACTCCTT 
TTATATTTTA TAGTTTCTTT TTTGTTTTTC TTTTTTATTT TTTTTGTAAA TCAGATTCTT 
TTAATGGCAG AAGAAATCCT CTCTAAAAAG GCTCCCACAA AAGATGTTTT ATTGCTCTTG 
TTTTATTCTC TTCCGTTTAT AATAGCTACA ACAGCTCCAT ATGCAGCCTT AATCGGAACC 
CTCATGTGCT TAGGCCGCTT TTCGGCAGAC CATGAATTTA TTTCGATGAA TGCTCTAGGA 
ATTTCGACCT CCTTTATTTT GATTCCGGTT TTTGCTTTAG GAGTTTTTGT TTCGGTAGGT 
TCGTTTATAA CAAACGATAT TTTGATTCCG CGCGGGACGA TAAAATTTAA TGAGGTGCTT 
TACAATATTG CTTCTTCAAC TCCTGCTCTT GAACTTGAGT CTTATTCGGT TAAGCGTAAT 
GAAAATTCGA TAGTTGTTTC AGGTTTGATA AAGGATAATT CAATCCATGA TCTTTTAATA 
ATCGATTCAA GCCAGAGGGG GGCAAAAAGA TTTTTATCTT CATCTCAAAC CGATGTAAAA 
AAATCCAACG ACAGATCGAT TATCATGCAG CTTGAAATGC TCAATCCCCG TCTTTTAAAT 
TTGGATTTAA ACAATAGATC TAAATTTGAT GTTGTCTATG GGGAAAGTAT AACCTACAAT 
GTTCTTGCAA AAGATGTTGC CCCTAAGTTT ATTTCAAGTT CAGGCCCCGA CAAGATGACT 
TCTTATGATC TAATAAAAGA TATAAAGCAA AAAAAGGAAG CCGGTGATAC AAGTCCGCGT 
CTTTTGAATA TCTATATTAT GGAGCTTCAC CGTAAATTTT CTGTTCCCTT CGGTGCCTTC 
TTTTTTGTAT TGTTGGCTTT TGCTATAAGC CGTGCCGGTA AGACCTATGA TCAGAGTACG 
GGCTTTATCG TGGGGCTTTT AATTTCAGTT GCTTATTGGG CTTTTTTGAT AGGAGGGCAA 
ATGCTCTGCC TTGAATCGGG CCTAAATATA AACGGAGCTC TTGTAATGTG GTTTCCGAAT 
GTTTTGTTGG TAATCTGCAC GGCTGTGATT GCAATAAAGA GGTTGTTAAA ATGA
 
Protein sequence
MRGLSFNHKT IFVYVFKELL LYFIVSFLFF FFIFFVNQIL LMAEEILSKK APTKDVLLLL 
FYSLPFIIAT TAPYAALIGT LMCLGRFSAD HEFISMNALG ISTSFILIPV FALGVFVSVG 
SFITNDILIP RGTIKFNEVL YNIASSTPAL ELESYSVKRN ENSIVVSGLI KDNSIHDLLI 
IDSSQRGAKR FLSSSQTDVK KSNDRSIIMQ LEMLNPRLLN LDLNNRSKFD VVYGESITYN 
VLAKDVAPKF ISSSGPDKMT SYDLIKDIKQ KKEAGDTSPR LLNIYIMELH RKFSVPFGAF 
FFVLLAFAIS RAGKTYDQST GFIVGLLISV AYWAFLIGGQ MLCLESGLNI NGALVMWFPN 
VLLVICTAVI AIKRLLK