| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1025 |
|---|
| Symbol | rpmF |
|---|
| ID | 2740965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 1057241 |
|---|
| End bp | 1057429 |
|---|
| Gene Length | 189 bp |
|---|
| Protein Length | 62 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637159898 |
|---|
| Product | 50S ribosomal protein L32 |
|---|
| Protein accession | NP_971633 |
|---|
| Protein GI | 42526535 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0333] Ribosomal protein L32 |
|---|
| TIGRFAM ID | [TIGR01031] ribosomal protein L32 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000103246 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTAC CAAGAGCGAA TACATCAAAA GCTAGAACAA GACGCCGACG CGGTGTTAAT
ATGCGTTTAC AAGCGCCAAA TCTTGTTGAG TGTTCCGGAT GCGGTAATTT GATTATGCCT
CATCATGTAT GCCCCAAATG CGGGTTTTAT AAAGGCAAGC AGGTTATTAA CCCCGATAAA
TTAGACTAA
|
|---|
| Protein sequence | MAVPRANTSK ARTRRRRGVN MRLQAPNLVE CSGCGNLIMP HHVCPKCGFY KGKQVINPDK
LD
|
|---|
| |