Gene TDE0973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0973 
SymbolradC 
ID2740545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp998030 
End bp998707 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content44% 
IMG OID637159847 
ProductDNA repair protein RadC 
Protein accessionNP_971583 
Protein GI42526485 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0497584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGACT ATAAAAATTC GTCCAATACG GACAAACCCG ATATGAGGGA AAGGCTTTTA 
GAGTACGGGC CTCAAAACTT AAGCGACTCC GATTTGGTGG CCATTCTTTT ACGGACAGGC 
ATTAAGGACA AGCCTGTAAA AGAATTGGCC GATGATATTA TTCTGCACAT CGATAGAGCA 
AGGCCTGAAA AAATTGAGGG CTATCTGCGT TCTATCCGCG GGATGGGAGA TTCAAAGATT 
TCAACGGTTC TTGCTGCCAT GGAATTGGGA AGGAGGTATT ATGACAACAA GAACCGCACG 
ATTTCACACC CGACCGATGT AGTTCCTCTT TTACAGCACT ATGCAGATAG GGATAGGGAG 
CATTTTATCT GCGTCTCGTT AAACGGAGCA AACGAAATTA TTGCAACCCG TGTTGTGAGC 
GTCGGCACTA TCAATAGAAC AATCGTGCAT CCTCGTGAAG TGTATTCAGA CCCTTTAAAG 
GACAGGGCTG CTGCAATAAT TGCTGCCCAT AATCATCCTT CGGGAAATCT GGAGCCCTCA 
AGTGAAGACA TGGAATTGAC AAAACGCATT TACGAGGCCG GAAAAATTTT AGGTATCAAG 
CTTTTGGATC ACATAATCTT AGTCCCTAAC GGAAATTTTT TCAGCTTTGT CCAAAGCGGA 
ACGAGGTTTG ATATTTAA
 
Protein sequence
MIDYKNSSNT DKPDMRERLL EYGPQNLSDS DLVAILLRTG IKDKPVKELA DDIILHIDRA 
RPEKIEGYLR SIRGMGDSKI STVLAAMELG RRYYDNKNRT ISHPTDVVPL LQHYADRDRE 
HFICVSLNGA NEIIATRVVS VGTINRTIVH PREVYSDPLK DRAAAIIAAH NHPSGNLEPS 
SEDMELTKRI YEAGKILGIK LLDHIILVPN GNFFSFVQSG TRFDI