| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0937 |
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| Symbol | |
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| ID | 2740970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 960091 |
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| End bp | 960951 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637159811 |
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| Product | RNA polymerase sigma-70 factor family protein |
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| Protein accession | NP_971547 |
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| Protein GI | 42526449 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAACA GGACAAAAAA TAATTATGAC GCAGAAATGA ACTCGTTGGC TACTTATTTA
AAAGAAATCA ATCAGATACC GCTTTTAACA GCTGAAGAAG AAATAAAATA TGCTAAACTC
GCCGAAAAGG GAGATGAAGA TGCCAAAAAT ATGTTGGTAA ATTCAAACCT CCGATTTGTT
GTAAATGTAG CAAAAAAATA TCAAAACCAA GGTCTTCCCC TTATGGATCT TATCAGCGAA
GGAAATATAG GCTTGATGAA TGCCGCCGAA AGATTCGATG TTTCAAAGGG CTATAAATTT
ATTTCTTACG CTGTTTGGTG GATTAAACAA TCTATCTTAA AAGCTATTTG CGAAAAATCA
AGGATGATAC GCCTTCCCTT AAACAGGGCA AACGAGCTTG TTCAAATAGA AAAGGCTAAA
AAAGAAATCG ACTTTTCGGG AAACGAAACT AAGGAACTTA ATGAGATTGC AGGCATCTTA
AATATGGACA ATTCTATGGT TCACACAATT ATGAATGCAG CCAGAGAGCC TATTTCCATA
GATGCTCCCG TTTTTGATGA GCCCGGAAGC TCCAGTGTAA ACGACTTTTT ACAGGACGAA
ACTCACCAAA TGCCTGAAGA CTACGCAATG GATATGAGCC TTAGAGATGA GGTAAACGAG
CTTCTTAAAA ACCTTGACGA TAGGGAAGCT GAGATAATAC GTTATCGTTT TGGGCTTGGC
GGTTATGCTC CTCTTTCGTT AAAAGAGGTA GGGCTTATCT TTAATCTTAC AAAAGAAAGA
ATACGCCAGA TTGAAAAAAA GGCCTTGCAG CAGCTTAAAA AGCCTGCCGA AAAACAGAAA
CTTGCCGTTT ACGTTGCGTA A
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| Protein sequence | MYNRTKNNYD AEMNSLATYL KEINQIPLLT AEEEIKYAKL AEKGDEDAKN MLVNSNLRFV
VNVAKKYQNQ GLPLMDLISE GNIGLMNAAE RFDVSKGYKF ISYAVWWIKQ SILKAICEKS
RMIRLPLNRA NELVQIEKAK KEIDFSGNET KELNEIAGIL NMDNSMVHTI MNAAREPISI
DAPVFDEPGS SSVNDFLQDE THQMPEDYAM DMSLRDEVNE LLKNLDDREA EIIRYRFGLG
GYAPLSLKEV GLIFNLTKER IRQIEKKALQ QLKKPAEKQK LAVYVA
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