| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0931 |
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| Symbol | |
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| ID | 2740396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 953851 |
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| End bp | 955197 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637159805 |
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| Product | MATE efflux family protein |
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| Protein accession | NP_971541 |
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| Protein GI | 42526443 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.102954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACT TAACTCAAGG AGATGAGCTA AAGCAAATAA CTCTTTTTTC ATTACCGATG
CTATTAGGTA ATATCTTTCA GCAGTTATAT AATGTTGTTG ACAGCATTGT AGTCGGAAAA
AGTATAGGCG ATCATGCTCT TGCTGCCGTA GGTATTTCTT TCCCTGTATG GTTTATTTTT
ATATCCCTTG TCATAGGTTT TACTATGGCT TGTAATATTT TAATAGCTCA ATTTGTCGGA
GCAAAAAAAG AAGAAGAAAT AAGTAAGGTA ATTCAAACAA GTATATTAAT TCTATTTTGG
GCAGGGCTTA TCGCTACGGC TATAGGCTTT GTTTTTGCGC CTTATATCTT AAAAATAATG
AACACTCCTT CCGATGTCTT TGAGGAAGCC CTTATCTATT TAAGACTCAT TTTTACCGGA
ATTATTTTTT TATTTATATA TAATGCCTTT ACTGCAATGC TGAGAGGATT TGGGGATTCA
ATGACACCCC TTTATGCCTT AATCATCTCT ACAATAATAA ATATAGGTCT TGACTGTCTT
TTTGTAATAG TATTCAAATG GGGTATTGCG GGAGCTGCAA TAGCAACCAT AATAGCCCAA
TTTATTTCTT GTTTTTGGCT TATATTTTAT TGTCGAATAA AATATAAGGA TTTTAGAGTA
AACTTTTTTA AATTAAAATT CGATAAAACT ATTTGTATTC AGTCCGTCAA AATGGGCTTT
CCATCAGGAA TACAGCAAGC CTTGGTCGGA GGAGGTTTTA TGGCCCTCCT TTCGATTGTA
AATACCTTCG GTACACAAAC GGCAGCAGCC TATTCAGCCG CAGGTAAACT TGACGGCTTT
ATTGTAATGC CAGCCCTAAA TATAGGCGTT GCCCTTTCAT CCTTTACAGG CCAAAACATA
GGAGCCGGAA GATTAGACAG AGTAAAAAAA GGTTTGCGGG CTTCATTATT TTTAGGACTA
GGAATTACAA TTACGGCTAC TACGGCAATA GTTATCTTCG GTAAAGCAGT TATGTTCCTT
TTTGTAAATA ATCCGGAAGT AATTGAATTG GGCGCAAGAT ACTTAATAAT AGTTGCACCT
GCATATTTTT TTAATACAAT AACATTTACT CTAAACGGAG TTATACGAGG AGCGGGAGAA
ACTGTTTTTC CGATGATTTC AACATTATTG GCTATGTGGG TGTTTAGAGT ACCGGCAGCA
GCCGTTCTGT CTCGATATTT AGGCTCGGAT GGGATCTGGC TTGCCGTTTC GGTTGGATCA
GCAGCAGGCT TTCTTTTAAC ACTCTTTTAC TATTGTTCAG GAAAATGGAA AAAAAAGACG
GCCGAAATTC TTAACTTAAA AAAATAA
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| Protein sequence | MKNLTQGDEL KQITLFSLPM LLGNIFQQLY NVVDSIVVGK SIGDHALAAV GISFPVWFIF
ISLVIGFTMA CNILIAQFVG AKKEEEISKV IQTSILILFW AGLIATAIGF VFAPYILKIM
NTPSDVFEEA LIYLRLIFTG IIFLFIYNAF TAMLRGFGDS MTPLYALIIS TIINIGLDCL
FVIVFKWGIA GAAIATIIAQ FISCFWLIFY CRIKYKDFRV NFFKLKFDKT ICIQSVKMGF
PSGIQQALVG GGFMALLSIV NTFGTQTAAA YSAAGKLDGF IVMPALNIGV ALSSFTGQNI
GAGRLDRVKK GLRASLFLGL GITITATTAI VIFGKAVMFL FVNNPEVIEL GARYLIIVAP
AYFFNTITFT LNGVIRGAGE TVFPMISTLL AMWVFRVPAA AVLSRYLGSD GIWLAVSVGS
AAGFLLTLFY YCSGKWKKKT AEILNLKK
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