Gene TDE0869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0869 
Symbol 
ID2740916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp891610 
End bp892722 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content36% 
IMG OID637159743 
Producthypothetical protein 
Protein accessionNP_971479 
Protein GI42526381 
COG category[S] Function unknown 
COG ID[COG5438] Predicted multitransmembrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0893767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGATA AAATCTTTGC GGTAATTATA TTTTTAATTA CTATCCTTTT ATTTATATTT 
ATGCCTCAAA TTCGGGACAG CTTAGGACAA AGACCTATGT TTATTCAGGA GTTTGCTGTA 
GGAGTGGTTC AAGATGTCTT AGAAGAAGAT CTTACTGAGG ATCCCATAGT TACCGGACGT 
TATCGCGGAG TACAAAAAAT TTCAGTGAAA ATTTTGGATG GCAGTAAAAA AAATAATGTT 
TATGAAACAT ATAATACTTT AAGTGCTCTG CATAATACAA GGGCCTATAA GGATTTAAAG 
GCTGTCTTTA CAATCAGGGT TCAAGACGGC AAAGAAAGTA TTTGGTTGTA CAATCAAAAA 
CGGGATACCC ATATTTATAT CTTAGTCTTG CTCTTTGCCC TTTCTTTAAT TTTTCTCGGC 
AAAAGGCAGG GCTTTAAGTC TTTACTGGGT TTGGTTTTTA CATGTACAGT TATTGTGAGC 
CTTTTAGTTC CTGCTTTATT TGCGGGCTTT GCACCTATTC CTATTTCCAT TTTACTTGTT 
TCGGTAGTCA CCTTCGTAAG TTTTATTTTG GTAAGCGGTT TTTCCCGTAA GACCTATGCT 
GCAATACTCG GGACCATTTG CGGAATAAGT ATAGCAGGGC TTATTTCGAT AATAGTTTCC 
TATACGGCAA ATCTTTCGGG TGTGAATATG GAAGGAGGAG AACAGCTTTT GAATATTGCC 
CCTGATTATA ATCTAAAATT AAACGGGCTT CTTTTTATTT CTATTTTAAT TGCTTCTCTT 
GGGGCTGTAA TGGATGTAAG TATGTCCGTC TCCTCTTCGA TGCACGAAAT ATTAACAATA 
GATCCTACAA TCGAAAAAAA GAAATTATTT AAATCAGGCC TAAATGTAGG AAAGGATATA 
ACCGGAACTA TGAGTAATAC TCTTATTCTG GCCTTTGCAG GGACATCTCT GCCTTTGATA 
ATGATGATAT GGGGATATGG CATGAGTTTA AGGCAATTTA TAAATATACC AAAAATTGTA 
ATACATATTG TACAAGGGCT TGCCGGCAGT ATGGGTATAA TAACATCTGT TCCATGTACG 
GCATTTTTTG CGGCAGTGCT TCCGCGTAAA TAA
 
Protein sequence
MRDKIFAVII FLITILLFIF MPQIRDSLGQ RPMFIQEFAV GVVQDVLEED LTEDPIVTGR 
YRGVQKISVK ILDGSKKNNV YETYNTLSAL HNTRAYKDLK AVFTIRVQDG KESIWLYNQK 
RDTHIYILVL LFALSLIFLG KRQGFKSLLG LVFTCTVIVS LLVPALFAGF APIPISILLV 
SVVTFVSFIL VSGFSRKTYA AILGTICGIS IAGLISIIVS YTANLSGVNM EGGEQLLNIA 
PDYNLKLNGL LFISILIASL GAVMDVSMSV SSSMHEILTI DPTIEKKKLF KSGLNVGKDI 
TGTMSNTLIL AFAGTSLPLI MMIWGYGMSL RQFINIPKIV IHIVQGLAGS MGIITSVPCT 
AFFAAVLPRK