Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0842 |
Symbol | cfpA |
ID | 2739619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 861855 |
End bp | 863903 |
Gene Length | 2049 bp |
Protein Length | 682 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637159715 |
Product | cytoplasmic filament protein A |
Protein accession | NP_971452 |
Protein GI | 42526354 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000333525 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAATT TAGATCTACC ACAGAGCCCG AATGTATTCC ATCCCGAGAA GCCCAGCGCT GTCGGTTCGA GAAACTCATT GGCTCAAGAC TATCGAGATC AGCAGAAAGA AGTTAATCAG CTGATTGAAG AAGAAACAAA TAAAGTGTTA CACCACTTGA CCACAAAGCT TCCCAAAGAA GTCCTTGAAA GATTGGACGT AATGGGCGGC GTTAAGGAAA AGCTGTATAA CTACTTTAAC CAGAACTACC AGAACATGTT CAACCGATAC ATGGTAACGG CTGAAGATGA AATGCTCAAA AAGGTTCGAG GATTTATCGA TCGGGAAGAA ATGAAGGTTT TAGACCGCTA TACTCCGAAA GAAATCGCTA CCCTTCTTGA TGCAGTTGGC GGTGCTGACA AGTTTAACAC AGGCGAAATC GAAAAATCGA TTGTAAACAT GTACGGTCAC TTACAGGGTC ACGTACAGCG CGGTGTTAAT GATTTGGAAA CCTTAACAAA CTCATTGTTA AGGCAGAAGA CGGACGTAGG TGCCTTCGTT CGAGGTGAAA ACGCATACTC AATCGTAAAG TGTGCATTTA AAGACAACCT CTACAAACCA AAGACTGTAA CCGATGTTAA GCTTTCCGTA AACATTCTTG ATACGGAACT TATCAGCCCG ATCTTCCAAT ATCAATCAAC AGTCGAATAT CTTATCAAAG ACCTCTTGTC AAATCACTAT ATGGATGTAA TTGACAAGGA AATTGAGAAG ATAAAGGACA AGAGAATTGA TCAGGGATTG GATGAATTGT CTGACGGCGA AATCATTTTC GCAAAAATCG ATAAGGTAGA TGGTATTACT GATGATGATG TTGAGAATCC CAAGAGCAAG AGATACGATG TAGTATCAAA GAAACTCATG GAAAGAATCA ATAACTTAAG AGCTGAAATC GATCCTGAGA CCTTTGATCA GCTTAATATC AGAGAAAACA TTAAAAAGAT CATCGACCTT GAAAACATCA GAAACCGCGG ATTTAATACG GCTATCAACT CGATTACCTC AATCCTTGAT ACCTCAAAGA TGGGATATCA GTATATCGAA AACTTAAAGA ATGCCCGTGA GCTTATCTTG CGAGAATATG ATGACACCGA TATCGCCAAC CTTCCTGATG AAAGGTATCA AATCCGCCTC AAGTATTATG ACAATGCTCA GTTGCTCGCA GAGCGACAGG CTTATGAAGT AATGATGAGC TCTTTCGAAA CTGAAATTCA GCACTTGTGG GATGTAGTAC GCACTACATA CGACAAATCC AAGTTTATGA CCAAAATCAC AGACTTTAAC GATTTGGCTG CAAATTACAG GAAATTCATC AAACGAAAGT ACAAGGATCC GTCCGGTGAG CCCGTATACG AAGATACCGC TAAGGTTTGG GATGAAATCT CCTTTGTTAA AGCTCCGGAA ACTGAAGTTG AAAAGATGAA CAGAACCTAT GTCTACGAAA AAGACAAGCT CCGCAAGAAG CTTATTATCA TGCGCAAGAG AATGAAGGAT TTGTATGATT ATCAATATCC TATCGAAAGA CGCGTTATCG AAGACAGACT TTCGTTTATA GAAGCAGAAT TCAACAAATT CGATTATTTA ATCAACCCCT TCCATATCCA ACCCGGTCTC TTGCTTGATA TCGATATTAC ATCTATCAAG AGAAAGAAGG CTACATTGGA CGGAATGGCC AACGTGCTCA ACGAATTCTT GCACGGTGTA TCAAAGGGCT TTGCCGACGC AGCATTTGCT TCGTTCAGCC GCCGACGATC CACAGTTCGT GCCGACATTG CACAGAGCTT TGCTGCTGCC GAAGATGATG ATCCCAAAGC CAGTGGAGCT GCAGGCCGCT CTCAGTTTAT CGATATGCTG AACAGCACTC CCGCCATTGC AGCTCCTGCA GCCGAGTCTG TAAGCTCTCC GGCTAAACGC AGAGGACCCA AAAAGAGTGC CTCTAAGGCA AGAAAGACAG GCTCTGTTGA TGCAGGACGA GGCCGACGAA AGGCTAAGTC AGGAATTAAA GAAATTTAA
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Protein sequence | MANLDLPQSP NVFHPEKPSA VGSRNSLAQD YRDQQKEVNQ LIEEETNKVL HHLTTKLPKE VLERLDVMGG VKEKLYNYFN QNYQNMFNRY MVTAEDEMLK KVRGFIDREE MKVLDRYTPK EIATLLDAVG GADKFNTGEI EKSIVNMYGH LQGHVQRGVN DLETLTNSLL RQKTDVGAFV RGENAYSIVK CAFKDNLYKP KTVTDVKLSV NILDTELISP IFQYQSTVEY LIKDLLSNHY MDVIDKEIEK IKDKRIDQGL DELSDGEIIF AKIDKVDGIT DDDVENPKSK RYDVVSKKLM ERINNLRAEI DPETFDQLNI RENIKKIIDL ENIRNRGFNT AINSITSILD TSKMGYQYIE NLKNARELIL REYDDTDIAN LPDERYQIRL KYYDNAQLLA ERQAYEVMMS SFETEIQHLW DVVRTTYDKS KFMTKITDFN DLAANYRKFI KRKYKDPSGE PVYEDTAKVW DEISFVKAPE TEVEKMNRTY VYEKDKLRKK LIIMRKRMKD LYDYQYPIER RVIEDRLSFI EAEFNKFDYL INPFHIQPGL LLDIDITSIK RKKATLDGMA NVLNEFLHGV SKGFADAAFA SFSRRRSTVR ADIAQSFAAA EDDDPKASGA AGRSQFIDML NSTPAIAAPA AESVSSPAKR RGPKKSASKA RKTGSVDAGR GRRKAKSGIK EI
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