| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0840 |
|---|
| Symbol | |
|---|
| ID | 2739617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 859509 |
|---|
| End bp | 860984 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637159713 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_971450 |
|---|
| Protein GI | 42526352 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00245278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAAC AGATAATGTA TGCTATCTCG GCTCTTATTA TTTTGATTGT GTTAAGCTTT
TTAATTTATT TAAAGTTTAT ACGGTCAAAT ACAAAAGGTG AAGAAAAAAT TGTTACACAA
ACAATAATTC CCATAGTTTC TTCACAAATC GATAATGAAA ATAAAAAAAC CGAAAATTAT
TCCGCGAATA CTGAAACAAG AATATTCTTG GAATTATCCA ATGATGAAAC CTTTGTTGAT
GCTATTTCGG ATGATTTAAA TGAAGACGGT GTAGAAGACC AAATTATTGC CGTAAAAAAA
CTATTGGATC CTTTTTTATA CCTGATCATT TCAATTCAAA ATCCGATAAC TCAAAAATGG
GAGAGGGTTG AAGAAATAAG AACAACGATC ACACAACCTA AGTCTCTTAC ATTCTACATT
ATGAATTTGA CGCAAGATCC CAAATCCCTT ATTTATTCCG GAATGACATC GGATAACAGG
CAGGCCTTAT CCATACATAC TATCAAAAAG GACAAAGGCG GAAATGTTGA GCTTGCCCAA
ATAGCCGACT TACATGCGGA TATGCAGATT CAGATCAAAG AAATTGAAAC TCAAGACGAA
GTCCCTGTTA GCCTATCTTC ATATCGTATA TACACTTACG ACTCCGACCC GGCGGCCCCC
AACACTCTAA ACCAAATTGA GACCGAATAT ACATGGAATG TGAAGACAAA AAAATATGAA
GAAGGTTTAA AAAAGACAAT TCCGGGTGAA AAAATAGAAA TTCAGCTTTT AAGAAAACTT
CAAAGCGGAA ATATGGAATC CTTTATAGAT TTTTTGTCCG GATTATGGTT TCAAGAAGAA
GGGAATAAAG AAACAGGCAG AAGTGTTTAT TTTGATAAAA ACGACAGTCA TATTATTTTT
AATTTAGACA ATGTTGAAGA AATCTATGAA ATAAAAACAA CCTTGCCTCG AAGGTACGGT
TTATTTTTTA CAACAAACAA TAAGTCGATT CCGAATATAA TAAGAAGAGT CGAAATTGAA
ATTAAGGGAC TTGATGAAAT ACAGGTGCGT GTAATAGAAG ACGTTTTAAG AATTAAATTC
GGAACCGCAT CTCTTTGGAA CGGAAAGTAT AAAAAAAATA CAAATTTACT TTTAAATAAC
ACAAACGAAA AAGAAAGCAA TGCGGAAAAA GCAAAAAGAA TTTTATCAAA ATCTTCAAAT
CGGTGGAAAT CGGCAAATAA CGTTTTTTTA GACCTTTTAG GAAATTCTTA TACACTTCAA
CAATCTGAAG ATATTGAAAA AGGTTATTTT AACATATTGG AAATAAACGA AAAAATCATA
ATGCAAATGA AATCCGAAAA AAACACAACT AAATTTTATC TGCTTGAAAT AAGTGAAAAG
AAAAATATGC AGCGGATGGT TTTAACAAAA ATTAAGTTGA GTATAAATGA TGCAATACCT
ACAGGTGATG AACCCATTGT CTTTGAAAGA GAATGA
|
|---|
| Protein sequence | MFKQIMYAIS ALIILIVLSF LIYLKFIRSN TKGEEKIVTQ TIIPIVSSQI DNENKKTENY
SANTETRIFL ELSNDETFVD AISDDLNEDG VEDQIIAVKK LLDPFLYLII SIQNPITQKW
ERVEEIRTTI TQPKSLTFYI MNLTQDPKSL IYSGMTSDNR QALSIHTIKK DKGGNVELAQ
IADLHADMQI QIKEIETQDE VPVSLSSYRI YTYDSDPAAP NTLNQIETEY TWNVKTKKYE
EGLKKTIPGE KIEIQLLRKL QSGNMESFID FLSGLWFQEE GNKETGRSVY FDKNDSHIIF
NLDNVEEIYE IKTTLPRRYG LFFTTNNKSI PNIIRRVEIE IKGLDEIQVR VIEDVLRIKF
GTASLWNGKY KKNTNLLLNN TNEKESNAEK AKRILSKSSN RWKSANNVFL DLLGNSYTLQ
QSEDIEKGYF NILEINEKII MQMKSEKNTT KFYLLEISEK KNMQRMVLTK IKLSINDAIP
TGDEPIVFER E
|
|---|
| |