Gene TDE0824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0824 
Symbol 
ID2739508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp845316 
End bp845966 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content40% 
IMG OID637159697 
Productputative lipoprotein 
Protein accessionNP_971434 
Protein GI42526336 
COG category[S] Function unknown 
COG ID[COG2340] Uncharacterized protein with SCP/PR1 domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000000106095 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACA AGTTATTTGC ACTTTGGCTC TTTGCAATCT TTATTTTGTT AAGTTCATGT 
GAAAATCTTT TTTTAGGTAA ACCCAAAAAT GTACATATTG TAAATGAAAT TCTAACTGAA 
CTTAACAGAG TGAGAAGTGA CCCTAAAAAA TATGCAGAAG AGGAGCTTAA GCCCCGACTG 
AAATATTTTG ACGGAAAACT ATATAAAGTT CCGGGACAAA TTCCTTTACA AACAAATGAG 
GGGGCACCGG CAGTACAAGA ATGTATTGAT GTTTTGATAA ATACAAACCC CATGGAAACT 
TTAGCGCTTG AAAACGGCCT GTGTCTTGCT GCCCAGTGGC TTGCCGATGA CCAGGCTAAT 
ACGGGAAAAA TAGGTCATAA CGGCAGCGAT GGGTCTTCTC CGTTTGACCG TATGAACCGT 
TATGGAAAGT GGCTTATAAA GGCAGGTAAA AACTGTGCAT ACGGCACTAA AACAGGGAAA 
GAAATTGTAG CACAGCTTTT AATCGACGAT GGAGTTATGA ACCGTGGACA CCGCAAAAAT 
ATTCTCAACC CGATATTTAA GAAGGTAGGT ATCGGTTATA ACGATGAGGG TAAAGCCCCC 
TACGGTGCCG TAAGCGTTAT GGACTTTGCA GGGGGCTATG TTTCAAAATA G
 
Protein sequence
MKNKLFALWL FAIFILLSSC ENLFLGKPKN VHIVNEILTE LNRVRSDPKK YAEEELKPRL 
KYFDGKLYKV PGQIPLQTNE GAPAVQECID VLINTNPMET LALENGLCLA AQWLADDQAN 
TGKIGHNGSD GSSPFDRMNR YGKWLIKAGK NCAYGTKTGK EIVAQLLIDD GVMNRGHRKN 
ILNPIFKKVG IGYNDEGKAP YGAVSVMDFA GGYVSK