| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0787 |
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| Symbol | secY |
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| ID | 2740665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 815208 |
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| End bp | 816524 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637159660 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | NP_971397 |
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| Protein GI | 42526299 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000240861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAATA ATGTATTTGC AAATATGTTC AAAATAAAGG ATTTACGAAG CCGTATTTTC
TTTACGATCA TAGTTTTAGC AGTTTTCCGC TTAGGTTCGG TACTCACCAT CCCCGGTATC
GATCCTGGGG CTCTTACAAT ATATTTCCGA CAAGGCCAGG GAAATGCTTT TGCAGATCAT
ATGGACTTCT TTGTCGGAGG AGCGTTTTCG AACTTTTCGG TATTTATGCT CGGTGTAATG
CCCTATATTT CGACTCAGAT ATTGATGCAG CTTGCCATGA TTATTTTCCC GCGCCTTAAG
AAAATAGCGG AAGAAGACGG AGGACGCAAA AAGATTCAGG TTTGGACAAG AATAGTTACC
GTCTTTGTTG CCCTTCTTCA ATCTTCCGCT GTAGGTACAT GGGCCAGAGC AATACCCGGT
GCTGTTGTAA TTTCAAGTCC TGTTTTGCAC TTGTTTATTA CGATGGTTAC GGTAACGACA
GGTACTATGA TTACCGTTTG GATGGGTGAA CAGATAACTG CAAGAGGTAT CGGAAACGGT
ATTTCAATGT TGATTTTTGC AGGTATCGTT GCCCGTCTTC CTCAGGCCGT TTGGGAATTG
ATCAAGCTTG TAAGCAATAA CGAATTAAAC CTTGTTTTTG TAATTATTGC TTTTGCGATG
TTTGTAGGAA TTATAGCCTT GGTTGTTTAC GAACAGCAGG GCCAGCGCAA AATACCGGTT
CATTATGCAA AGCGCGTTAT CGGCCGAAAA ATGTATGGCG GACAGAATAC CTATATTCCG
TTTAAGATTA ACCCCTCGGG TGTTATTCCC ATCATTTTTG CTTCATCGTT TTTAACCTTT
CCCCTCATGC TTTCGCAGAT GTGGGGCTCG AATGTTTCTT GGTTGGCTTC AGTTGCAAGA
TTTTTGCGCT CGGACGGCTG GGGGTATAAC GTTCTGTATG TTGTTTTGAT TATTTTCTTT
GCTTACTTTT ACACACAGGT TGCACTTAAT CCCACGGAAA TAGCAAAACA AATAAGGGAA
AACGGCGGCT CGATTCCGGG AATTAGAACC GACAAAACCG AAGAATATTT GCAGAAGATT
TTAAACAGAT TGATATTGCC CGGTTCGCTT TATTTGGCTG CGATTGCAGT ACTTCCTACT
GTAATTCAAT GGGCATTTAG TTTCCCCAGA AATATTTCTA TGTTGATGGG AGGAACTTCA
TTGCTTATTT TGGTTGGTGT TGACTTGGAT ACAATGAGCC AAGTTGAAGC TTTGCTTAAA
ATGCACCATC ATGACGGCTT GCTTAAAAAA GGCAAGATTA GATCAAGGAA CCTATAG
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| Protein sequence | MANNVFANMF KIKDLRSRIF FTIIVLAVFR LGSVLTIPGI DPGALTIYFR QGQGNAFADH
MDFFVGGAFS NFSVFMLGVM PYISTQILMQ LAMIIFPRLK KIAEEDGGRK KIQVWTRIVT
VFVALLQSSA VGTWARAIPG AVVISSPVLH LFITMVTVTT GTMITVWMGE QITARGIGNG
ISMLIFAGIV ARLPQAVWEL IKLVSNNELN LVFVIIAFAM FVGIIALVVY EQQGQRKIPV
HYAKRVIGRK MYGGQNTYIP FKINPSGVIP IIFASSFLTF PLMLSQMWGS NVSWLASVAR
FLRSDGWGYN VLYVVLIIFF AYFYTQVALN PTEIAKQIRE NGGSIPGIRT DKTEEYLQKI
LNRLILPGSL YLAAIAVLPT VIQWAFSFPR NISMLMGGTS LLILVGVDLD TMSQVEALLK
MHHHDGLLKK GKIRSRNL
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