| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0783 |
|---|
| Symbol | rplR |
|---|
| ID | 2740661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 813660 |
|---|
| End bp | 814022 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637159656 |
|---|
| Product | 50S ribosomal protein L18 |
|---|
| Protein accession | NP_971393 |
|---|
| Protein GI | 42526295 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0256] Ribosomal protein L18 |
|---|
| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0707511 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAA AACGTAATGA TAAAGATAGA AAAAGATTTA AGCGAAAGAT GCACATTCGA
AAGTCTATTT TCGGTACTGC AGAACGTCCG CGCATGACCG TGTTCCGAAG CAATAAGCGC
ATTTCGGTTC AGGTTATTGA CGATGTAGAG GGCAAGACAT TGGCTGCCGT TTCTACAATG
GAAGAAGCTC TTCGATCGCT TAAGGTTAAT GTTGAATCTG GGGCAAAGGT CGGTGAAGAA
ATCGGCAAGC GCCTCAAGGA AAAAAATATT GACACTGTTG TTTTTGACAG GAACGGATAT
CTTTACCACG GTGTTGTAAA GGCCGTTGCC GACGGTGCAA GAAAAACAGG AATTAAGTTT
TAG
|
|---|
| Protein sequence | MDKKRNDKDR KRFKRKMHIR KSIFGTAERP RMTVFRSNKR ISVQVIDDVE GKTLAAVSTM
EEALRSLKVN VESGAKVGEE IGKRLKEKNI DTVVFDRNGY LYHGVVKAVA DGARKTGIKF
|
|---|
| |