Gene TDE0779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0779 
SymbolrplE 
ID2740657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp811941 
End bp812492 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content42% 
IMG OID637159652 
Product50S ribosomal protein L5 
Protein accessionNP_971389 
Protein GI42526291 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000663663 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAATT ACGTACCTCG GCTTAAGAAA GTCTATACAG AACAAATCAT GCCCGAGCTT 
AAAAAGGAAT TTAACTACAG TTCCGTTATG CAAATTCCTC GGCTTAAAAA AGTCGTAGTA
AGCATGGGCG TTGGTGTAGC TCTCACGAAT AGGAAACTAC TTGATGCTGC AGTAACTGAC
CTTGAAACAA TCACCGGTCA AAAAGCTGTG AAAACAAAGG CAAGAAAGAG TATAGCAAAC
TTTAAACTTC GTGAGGGAAA TGAGATTGGG GCAATGGTAA CTTTGCGCGG TGCTAGAATG
TATGAATTCT TAGACCGCTT TATCAATGTT GCTTTGCCGC GTGTTAAGGA TTTCCGCGGA
GTTAACCCGA ACGGTTTTGA CGGTCGCGGA AACTATTCAG TGGGTATTAC CGAGCAGATC
ATCTTCCCCG AAATCGACTT CGATAAAATC GAACGAATTT CAGGATTGAA TGTGAACGTA
GTAACTTCTG CCGAGACTGA TCAAGAGGCA AGATCGCTTC TTGCAAAGTT TGGTATGCCC
TTTAGGAAGT AA
 
Protein sequence
MSNYVPRLKK VYTEQIMPEL KKEFNYSSVM QIPRLKKVVV SMGVGVALTN RKLLDAAVTD 
LETITGQKAV KTKARKSIAN FKLREGNEIG AMVTLRGARM YEFLDRFINV ALPRVKDFRG
VNPNGFDGRG NYSVGITEQI IFPEIDFDKI ERISGLNVNV VTSAETDQEA RSLLAKFGMP
FRK