Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0712 |
Symbol | |
ID | 2740619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 746271 |
End bp | 747053 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637159587 |
Product | hypothetical protein |
Protein accession | NP_971324 |
Protein GI | 42526226 |
COG category | [S] Function unknown |
COG ID | [COG2966] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0658885 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGAAAA TAATGGAAGA AGAAAAAAAC TCGGCATTAA TTTTTAGAAT AGCCTTGGCG GCAGGAGAGC TTCTAATAAA AAACGGAGCA GAGATGCATA GAACGGAAGA AACTATTTTA AGAATATGCT CTTCACACGG TATTACCGGT CTTGCCGTTT TTATAACTCC GACAGTAATA TTAATAGGAA ATGACAAGAA GGAAGGCTCA ACTTATATTA AAAACATAAA AGTCAGAGGC AGCAATATAC ACAAAATTTC CTTGGTCAAC GAATTTTCAA GAAACTTTAC TCAAGGTAAA ATTTCTGAAA ATGAAGCCCT TGAGATTTTA AAAAATATTG ATGCAGAAAA AAATTATCCG TATTGGCTTG TATTAACCAC CTCCGGAATA GGCTGCGGTC TTTTTTCTGT TTTGCTCGGC GGAACATTAA ATGATTTTAT AGTTACTTTT ATTGCCACCT TTGCAGCCGT TTTTTTAAAT GATAGAATTA CGCAGTTTTC CAAAACGGTA TTTTTAGGAA ACTTTATAGC GGGCTTTTTT GTCGGTATAA TAACAATTCT TTTTTATCAT ATAGGCTTTG TAAAAAATCT TGACATGATA ATAGTTGGAG CCGTTTTATC CCTTGTACCG GGGGTAGCCT TTACATCAGG TATACGGGAT TTCATTTTGG GAGACTTAGT TTCCGGAATT GCCCGCACCA GTGAGGCCGT ACTCATAGCC GTTGCAATAG CCTTCGGTAT AGGTTCTGTT CTTTTCAGTT ATTCTCTTTT GGGAGGAATA TAA
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Protein sequence | MRKIMEEEKN SALIFRIALA AGELLIKNGA EMHRTEETIL RICSSHGITG LAVFITPTVI LIGNDKKEGS TYIKNIKVRG SNIHKISLVN EFSRNFTQGK ISENEALEIL KNIDAEKNYP YWLVLTTSGI GCGLFSVLLG GTLNDFIVTF IATFAAVFLN DRITQFSKTV FLGNFIAGFF VGIITILFYH IGFVKNLDMI IVGAVLSLVP GVAFTSGIRD FILGDLVSGI ARTSEAVLIA VAIAFGIGSV LFSYSLLGGI
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