Gene TDE0682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0682 
SymbolyajC 
ID2740241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp720755 
End bp721168 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content40% 
IMG OID637159558 
Productpreprotein translocase, YajC subunit 
Protein accessionNP_971295 
Protein GI42526197 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTTA TGCCTTTATT GCAAGGAACC GCTCCGGGCG GTTTCGGCTC CTTCGGTTTT 
TTAATACCGA TGCTCTTGGT ATTCGTTATT TTTTATTTTT TGCTTATCCG CCCGCAGAAA
AAGGAACAGC AAAAAACCGA AAAGATGATT TCTCAGCTTC AAAAGGGAGA TAAGATCATC
ACTATCGGCG GTATTCACGG TGTTGTGAGC TCAACAAAAG AAAAGACAAT TATCATAAAA
GTTGATGACA ACTGCAAGAT TGAAATTAAC CGTTCTGCAG TAGGGGCCGT TTTAAAAGAT
GAGCCTCCAA AGCCTGATTT CGGAGGAGAA GGCGAAAAGA AAAAATCTCT ATTCGGAAAA
AAGGCCGATG ACTCCGCAAA TGACGATACA GTTTCACAAA ACGAGTCAAA ATAA
 
Protein sequence
MNFMPLLQGT APGGFGSFGF LIPMLLVFVI FYFLLIRPQK KEQQKTEKMI SQLQKGDKII 
TIGGIHGVVS STKEKTIIIK VDDNCKIEIN RSAVGAVLKD EPPKPDFGGE GEKKKSLFGK
KADDSANDDT VSQNESK