Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0682 |
Symbol | yajC |
ID | 2740241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 720755 |
End bp | 721168 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637159558 |
Product | preprotein translocase, YajC subunit |
Protein accession | NP_971295 |
Protein GI | 42526197 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1862] Preprotein translocase subunit YajC |
TIGRFAM ID | [TIGR00739] preprotein translocase, YajC subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTTA TGCCTTTATT GCAAGGAACC GCTCCGGGCG GTTTCGGCTC CTTCGGTTTT TTAATACCGA TGCTCTTGGT ATTCGTTATT TTTTATTTTT TGCTTATCCG CCCGCAGAAA AAGGAACAGC AAAAAACCGA AAAGATGATT TCTCAGCTTC AAAAGGGAGA TAAGATCATC ACTATCGGCG GTATTCACGG TGTTGTGAGC TCAACAAAAG AAAAGACAAT TATCATAAAA GTTGATGACA ACTGCAAGAT TGAAATTAAC CGTTCTGCAG TAGGGGCCGT TTTAAAAGAT GAGCCTCCAA AGCCTGATTT CGGAGGAGAA GGCGAAAAGA AAAAATCTCT ATTCGGAAAA AAGGCCGATG ACTCCGCAAA TGACGATACA GTTTCACAAA ACGAGTCAAA ATAA
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Protein sequence | MNFMPLLQGT APGGFGSFGF LIPMLLVFVI FYFLLIRPQK KEQQKTEKMI SQLQKGDKII TIGGIHGVVS STKEKTIIIK VDDNCKIEIN RSAVGAVLKD EPPKPDFGGE GEKKKSLFGK KADDSANDDT VSQNESK
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