Gene TDE0679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0679 
Symbol 
ID2739672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp716485 
End bp717633 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content43% 
IMG OID637159555 
Productaminotransferase, class V 
Protein accessionNP_971292 
Protein GI42526194 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID[TIGR01977] cysteine desulfurase family protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTATC TTGATAATAG CGCAACCACC CTTCAAAAGC CTGAAAGCGT GGCCCAAGAG 
GTATTTAGGG GGATTGCTTC ACATCAATTC GGGAATCCGG GGAGAGGAGC CCATAGTACG 
GCTCATGCAG CCCTCACAGA GCTTTTTAAA ACAAGGCAAA CTTTGGCAAA GCTTTTTAAT 
ATAAAAAATC CCTTAAATGT TGCCCTTTGT CAAAATGCTA CATCTGCCTT AAACCTCGTT 
ATAAAAAGCC TTTTTTCTGG TAAAGAAAAT ACTCACGTCA TAACTACTGT TCTTGAGCAT 
AACTCTGTTT TACGTCCCCT TTATCAGCTC GAAAAAGATG GAGCCGAACT TTCAATTATT 
CCTATCCAAG ACGGCTTTTT GTGTTATGAG CTCATCGAAA AAGAGGTCAA ATCAAACACC 
AAAGCAATTA TCGTAAACCA CTGCTCAAAT GTGATAGGCT CAATCTGTAA CTTGGACTAT 
GTTCATTCCA TATGCAAAAA ACATGGTCTA ATCTTAATTG TAGATGCTTC GCAAAGTGCG 
GGTACAATTC CTATAGACGC ATCAAAATAC GGGCAAAGCA TTTTTTGTTT TACCGGCCAC 
AAAGGGCTTT ACGGGCCTCA GGGTACGGGC GGTATTATCG TAAACGGAAC CTTCGAGTTT 
GCCCCCGTCT TTTCGGGGGG AAGCGGGGTT CGCTCTTTCG ATAAAACTCA CCCCTCCGAG 
ATGCCCGACA TCTTTGAAGC GGGCACCATG AATGTTCCGT CCTTTATGGG CTTAAATGCA 
GGGGCTTCCT ACGTTTTAAA AACAGGAATC TCTTCCATTC AAAAGAAATT GGCCGATTTA 
AAATTGCTTT TTATCGAAGA AATAAAAACT ATTCCTAATC TTAAAATATA CGGAAATCCT 
TGGAGCGAAA AAACAGGGGC GGTCGTAGGT ATAAACATAG GAGATATTCC CTCGGGAGAA 
ATAAGCCGCC TCCTCGATGA AGAGTTCGGC ATCGCAAGCC GGCCGGGAGC CCACTGTGCT 
CCCTTGGTAC ACAAGGCTCT CGGAACCGAA GAGCAGGGCA TAGTCCGCTT TAGTTTTTCT 
TCTTTTAACA CCTTTGAAGA AGTCAAACAG GCTGCCGAGG CCTTAAAACA AATAGCTCAA 
AACGCATAA
 
Protein sequence
MIYLDNSATT LQKPESVAQE VFRGIASHQF GNPGRGAHST AHAALTELFK TRQTLAKLFN 
IKNPLNVALC QNATSALNLV IKSLFSGKEN THVITTVLEH NSVLRPLYQL EKDGAELSII 
PIQDGFLCYE LIEKEVKSNT KAIIVNHCSN VIGSICNLDY VHSICKKHGL ILIVDASQSA 
GTIPIDASKY GQSIFCFTGH KGLYGPQGTG GIIVNGTFEF APVFSGGSGV RSFDKTHPSE 
MPDIFEAGTM NVPSFMGLNA GASYVLKTGI SSIQKKLADL KLLFIEEIKT IPNLKIYGNP 
WSEKTGAVVG INIGDIPSGE ISRLLDEEFG IASRPGAHCA PLVHKALGTE EQGIVRFSFS 
SFNTFEEVKQ AAEALKQIAQ NA