| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0630 |
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| Symbol | |
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| ID | 2739355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 663980 |
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| End bp | 665431 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637159506 |
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| Product | sigma factor regulatory protein, putative |
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| Protein accession | NP_971244 |
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| Protein GI | 42526146 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAAAT TACGTAAATT ACTTTCAAAT ATTCTAATAA GTGTTGGGAT GGGGAGTGTT
TTTGCCCTCT TCTTGATATT TGTCAGCCCG AGATTTTTGT TTTTAGGTAA ATTTTATTCG
GCTAATGATA TGACTCTGGC TTTGAGCCGA TTGGAAATAA TTCCTGAGAT AACACAGATT
CACCGTTTTA TCATAGGATC CTTGGTTTTT GTTATTGTTG CAATCTTTGC AGACTCTCTT
ATACGCAGCT TTTATAAGAA AATAGAAAGT AGGGCGTATG ATAAGCCTAA AACTAAGGTT
TTTGCGGAAT TTTTGAAAAA AATTCGGTTT TGTTACACTA TAGAAAATTT AATAGATACC
GTACAGAATG AGCTTGAGTA TTCGGGTGAC TGTTCGGTAA TGCTTGTAGA TACCATAGAA
AATATTGTAT TATATAATAG TGCTTCAAGA TTTATTTCCT CTCCTGAAAC TTTTTCTTCT
CTGCATGAAA TTACAGTAGA ATACAAGCCC GGAGTTTATT TTTTTAATGC AGATATGCAG
GGATGCAAAC TTAAAGATGC CCGTATTGCT GCTGTAATCT TAGAAAAAAT ACAATTTTTT
ATTATTTGCG GATATTTTAA CGAGGTGGAA CCTGAGATTT TTAATACACT GTTTTCGGAA
TTTTTGAGTT ATCAAAACAG GGTTACTACT CTTGAACAGC TTTTATACTT TTCGGAATTA
AGCCAAGAAT GGAACATGGT TGCCAACACA CAAAAAGCCT TCTTACCTCA AAAGCTCCCT
GAGATGCCTA TGCTTGAGTT GGCGGCTTAT TTTAAACCTC TTGTAAACGT ATCAGGGGAT
TATTATGATG CCATAAAAGT TGATGAACAT AAAACCCTCT TAGTTGTAGG GGACGTCTCC
GGTAAGGGCC TTTCGGCTGC ATTGGTTATG GGTATTGTTG TAAATACAAT CAAAATAGCA
AAAAATAAAG AAGACCTTCC TGCTCTTGTT TTGGCGGTAG ACAGCGCCAT AAAAAGAATG
GGCCTTTTGG ATAAGTATAC GGTTTTATTT TTGGGTTTAG TTGATACCGA AAAAATGACT
ATAAAATATG TTAATGCCTC AATGGAAGAT CCGATGATTC TTACGGAATC GCCGGACGGC
TACAAGGTAA AGGTTCTTGA ATCTACTTGC AGTATTGTAG GTATTATTGA CTTCGATAAA
ATAGAAGTTC ATGAAAGGCC TCTCTATCGA GGTGATGTTA TTTTGATGAT GACTGATGGC
GTTCCCGAGG CTATGAATAA TGAAGGTGTT GAATTAGCTG AGACCGATAT GTACATGGAA
TCTATAAAAT CCTTTGTTCA ATATAGTGCA GATGATATAG TGCAAAAAGT TGCCGGTATG
GCTTATGCTC ATGCAGGTAA TCAGCCCATG AGAGACGACA TTACTATAAT GTGTGCTAAG
GTTAAGGGGT AA
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| Protein sequence | MIKLRKLLSN ILISVGMGSV FALFLIFVSP RFLFLGKFYS ANDMTLALSR LEIIPEITQI
HRFIIGSLVF VIVAIFADSL IRSFYKKIES RAYDKPKTKV FAEFLKKIRF CYTIENLIDT
VQNELEYSGD CSVMLVDTIE NIVLYNSASR FISSPETFSS LHEITVEYKP GVYFFNADMQ
GCKLKDARIA AVILEKIQFF IICGYFNEVE PEIFNTLFSE FLSYQNRVTT LEQLLYFSEL
SQEWNMVANT QKAFLPQKLP EMPMLELAAY FKPLVNVSGD YYDAIKVDEH KTLLVVGDVS
GKGLSAALVM GIVVNTIKIA KNKEDLPALV LAVDSAIKRM GLLDKYTVLF LGLVDTEKMT
IKYVNASMED PMILTESPDG YKVKVLESTC SIVGIIDFDK IEVHERPLYR GDVILMMTDG
VPEAMNNEGV ELAETDMYME SIKSFVQYSA DDIVQKVAGM AYAHAGNQPM RDDITIMCAK
VKG
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