Gene TDE0629 details

Gene Information

• Locus tag: TDE0629
• Symbol: dnaJ
• ID: 2739354
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 662727
• End bp: 663908
• Gene Length: 1182 bp
• Protein Length: 393 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637159505
• Product: chaperone protein DnaJ
• Protein accession: NP_971243
• Protein GI: 42526145
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain
• TIGRFAM ID: [TIGR02349] chaperone protein DnaJ

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.976387
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTTTAG AGGTTCCGAA ATTTTTACAC TGGGAGTTTT TAGTGCCGGC ATCTAAAAGA 
GACTATTATG AGGTTTTGGG CGTAGATAAA AAAGCCTCAA ACGATGACAT CAAAAAAGCA 
TATCGAAAAT TAGCAATCAA ATATCATCCC GATAAAAACC AAGGGGATAA GGCTGCTGAA 
GAAAAATTTA AAGAAGCAAC CGAAGCTTAT GAAATTCTTA TCGACGAAAA AAAGCGCAGC 
ATGTATGACC AATTCGGCCA TGCCGGCGTA GACGGAATGT CGGGCGGCGG AGGCTATGAT 
CCTTCCGCCT TCCAAGGTTT TGAGGATATC TTCGGCGGAA GCTTTTCGGA TATTTTTGAA 
AATCTATTCG GAGGAGGGTT TTCTTCCCGC TCATCAGGTT TCGGCGGCCG CCATGCAGGT 
CCTGTCCGCG GTTCTAACCT GCGCTATGAT CTTCAAATTT CTTTTGTTGA TGCCGTTTAC 
GGTAAAAAAG CCGAACTCAG TTATACCCGC AATGAAAAAT GTTCCGAATG TCATGGAACA 
GGCAGCGAAA GCGGAAGCTC AAAAAGAATG TGTCCCGATT GTAAGGGTAC GGGACAAGTG 
CGCCAAAGTA CCGGTTTCTT TTCCATATCG AGACCATGTC CTACCTGCGG CGGCGAAGGC 
TCCATAATCG AAAAACCATG TAAAAAATGC GGAGGAAACG GCTTAGAGCG TAAGAAACAG 
CGCATAATCG TTACCATTCC TGCCGGTGTC GAAAACGGAA AACGGATTAC GATTCCCAGT 
CAAGGAAATG CCGGTCAGGC CGGCGGAGAC TACGGCGACC TCTTTGTATT TATCTTTGTT 
CAAGCTCATC CTTATTTTGA ACGTAACGGA ATAGACCTCT ACTGTGCTGT TCCCATATCA 
ATGACTCAGG CAGCCTTGGG CGGGGAAATA AACATCAAAT CTCTCGATGA AAAAACATTG 
AGACTAAAAA TTCCGGCCGG AACACAAAAC GGAAAACTTT TAAGGATTCG AGGCGAAGGT 
GTTCCTACGG GAATAGGCCG AAAGGGCGAT CTTTATATTC AAATTCAAGT GCAAATTCCT 
TCAAAATTGT CATCAAATTC AAAAAAACTT TTGCAAGAAA TTTCGGCGAT TGAAGGTGAA 
AATGAAAATC CTAATCTTAT CCCTTTAAAA GATTTACCTT AA 

 

Protein sequence

MFLEVPKFLH WEFLVPASKR DYYEVLGVDK KASNDDIKKA YRKLAIKYHP DKNQGDKAAE 
EKFKEATEAY EILIDEKKRS MYDQFGHAGV DGMSGGGGYD PSAFQGFEDI FGGSFSDIFE 
NLFGGGFSSR SSGFGGRHAG PVRGSNLRYD LQISFVDAVY GKKAELSYTR NEKCSECHGT 
GSESGSSKRM CPDCKGTGQV RQSTGFFSIS RPCPTCGGEG SIIEKPCKKC GGNGLERKKQ 
RIIVTIPAGV ENGKRITIPS QGNAGQAGGD YGDLFVFIFV QAHPYFERNG IDLYCAVPIS 
MTQAALGGEI NIKSLDEKTL RLKIPAGTQN GKLLRIRGEG VPTGIGRKGD LYIQIQVQIP 
SKLSSNSKKL LQEISAIEGE NENPNLIPLK DLP