Gene TDE0623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0623 
SymbolcobJ 
ID2740468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp655923 
End bp656645 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content43% 
IMG OID637159499 
Productprecorrin-3B C17-methyltransferase 
Protein accessionNP_971237 
Protein GI42526139 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1010] Precorrin-3B methylase 
TIGRFAM ID[TIGR01466] precorrin-3B C17-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0224111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTAAAC TATTTGTTGT AGGTATAGGC CCCGGCGGGA CGGAATATAT GTCGGCTCAG 
GCTGTCGAGG CCTTAAAGCA ATCCGAAATA ATCGTAGGTT ATTCAGGCTA CATTGAATAT
ATAAAACCCT TTATCGAAGG CAAAGAAGTT TTTCAAACGG GAATGACCGG CGAAATTGAA
AGATGTAAGT ATGCAGTTTC AAAAGCGAAA GAAGGAAAAA CCGTAAGCAT TATAAGCACC
GGAGATGCCG GCCTTTACGG AATGGCAGGC CCCATCTTGG AGCTTGCTCC CGATTTAAAT
GTCGAAATAA TTCCGGGTAT TTCCGCCGCC TTTGCTGCAG CTTCAAGACT GGGAGCCCCC
TTAATGCACG ATACGGCCCT TATCAGCCTT TCCGACAGGC TCACCGATTA CGAGGTTATA
AAAAAAAGAG TCGGCTTAGC GGCGGAGGGC GACTTTGTAA TTGCCCTCTA CAATCCCAAA
TCCAAAACCC GTTCAGATTA TATCGAAGAA GCCGTAAATA TAATCTTAAA ATTCAGGGCT
CCCCAAACGC CCGTAGGCAT AGTAAAAAAT GCCTGCCGTA ATAACGAAAA AATTACCGTT
ACCGAGCTTC AAAAAATAAA TTACGATGAA ATCGATATGT TCAGCCTGAT AATAATAGGC
AACAGCAACA CCTACATTCA AAACGGAAAA ATAATCACCC CGCGAGGATA TAAGATTAAA
TGA
 
Protein sequence
MSKLFVVGIG PGGTEYMSAQ AVEALKQSEI IVGYSGYIEY IKPFIEGKEV FQTGMTGEIE 
RCKYAVSKAK EGKTVSIIST GDAGLYGMAG PILELAPDLN VEIIPGISAA FAAASRLGAP
LMHDTALISL SDRLTDYEVI KKRVGLAAEG DFVIALYNPK SKTRSDYIEE AVNIILKFRA
PQTPVGIVKN ACRNNEKITV TELQKINYDE IDMFSLIIIG NSNTYIQNGK IITPRGYKIK