Gene TDE0596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0596 
Symbol 
ID2741559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp635072 
End bp636100 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content37% 
IMG OID637159472 
Producthypothetical protein 
Protein accessionNP_971210 
Protein GI42526112 
COG category[R] General function prediction only 
COG ID[COG3943] Virulence protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAG ATATTCAGGT GCGGAACAGT GTCAGCGATT TTCTCATTTT TACTAAGCAA 
ACGGGCGGAG ATGGTATACA GGTTCGATTG CATGACGAGA ATATTTGGCT GACACAAAAG
TCGATGGCTC AATTATTTGA TTGTTCAATC GATAACATTG CTCTACACTT AAAAAACATA
TTTCAAACAG GAGAGCTTGA TGAAATGGCA ACTACCGAGG ATTCCTCGGT AGTTCAAAAA
GAGGGTGAAA GAAATGTGAG TAGGAACATG AAGTTTTACA ATCTTGATGC CGTTATTTCC
GTAGGATACC GTATTAACTC CGTTCGAGCA ACTCAGTTCC GTAAATGGGC AACGGATGTA
TTAAAACAAT TTACCATTAA AGGCTATGTA CTTGATAAAA CCCGCTTGGA AAACGGACAA
ATTTTCGATG AAAACTATTT TGACCATCTG CTTGATGAAA TAAGAGAAAT CCGTGCAAGT
GAGCGCAAGT TCTATCAAAA AATAACGGAT ATTTATGCGA CAGCCTCAGA TTATTCTCCC
AACTCCATAA TCTCAAAGAC ATTTTTTGCA ACCGTACAAA ATAAACTGCA CTATGCAATT
CACGGCTCTA CTGCTGCAGA AGTTATTTAT ACACGAGCTG ATTATCAAAA GAAAAACATG
GGGCTTACTT CATGGAAAAA TTCACCTAAG GGTAAAATAT TAAAGAGCGA TGTCAGCATT
GCAAAAAATT ACTTATCTGA AACGGAATTG CAGGATTTAA ATCAATTTGT TTCCATGTAT
TTGGACTATG CTGAACGGCA GGCAAAAAAG AAAATACCAA TGACAATGGA AGACTGGGCT
AAAAAGCTGG ATGTTTTTTT GGAGTTCAAC GAAGAAGCTA TTTTAACAGA CAAGGGTAAG
GTATCGACAG CGATTGCAAA AAGTTTTGCC GAATCAGAAT TTGAAAAATA CCGTATCATT
CAGGATAAGA CCTTTGTTTC CGATTTTGAC AAATACTTAG CGGAATTGGA AAATACCATT
AGCGGATAA
 
Protein sequence
MAKDIQVRNS VSDFLIFTKQ TGGDGIQVRL HDENIWLTQK SMAQLFDCSI DNIALHLKNI 
FQTGELDEMA TTEDSSVVQK EGERNVSRNM KFYNLDAVIS VGYRINSVRA TQFRKWATDV
LKQFTIKGYV LDKTRLENGQ IFDENYFDHL LDEIREIRAS ERKFYQKITD IYATASDYSP
NSIISKTFFA TVQNKLHYAI HGSTAAEVIY TRADYQKKNM GLTSWKNSPK GKILKSDVSI
AKNYLSETEL QDLNQFVSMY LDYAERQAKK KIPMTMEDWA KKLDVFLEFN EEAILTDKGK
VSTAIAKSFA ESEFEKYRII QDKTFVSDFD KYLAELENTI SG