Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0588 |
Symbol | hutH |
ID | 2741551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 626590 |
End bp | 628113 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637159464 |
Product | histidine ammonia-lyase |
Protein accession | NP_971202 |
Protein GI | 42526104 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase [TIGR01226] phenylalanine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTAA AACCAGTAAC AGTAACCGGC AGCAGTTTAA CAATAGAAGA CGTTGTAGCT GTTGCCCGCC ACGGAGCGGA AGTAAAGCTG TCCGCAGATG CAAAAAAAAG AATCAAAGAT TCAAAGAAGA TTGTAGATGA TATCGTAAAA AGCGGTAAAC CTACTTACGG CATTTCGACC GGCTTTGGAG AATTATCCAC CGTAACCATT ACCAAGGATC AAAACGGTGC TCTGCAGAGG AATTTAATAT TAAGCCATGC CTGCGGTGTA GGCAATCCCT TCCCCGAAGA CATAGTTAGG GCTATAATGC TTTTAAGGCT TAACACTCAT GCGAGCGGTT TTTCGGGAGT AACCCCGTCT GTCCCGGATA TTCTTGTAGA TATGTTAAAC AAGGGTGTAA TCCCCTATGT ACCCGAAAAA GGTTCATTAG GAGCAAGCGG TGACTTGGCA AACCTTGCTC ATATTGCCCT TGTAATGATA GGAGAGGGAA AGGCCTATTA TGAGGGCAAG CTTATGGAAG GAAAGGCAGC TCTTGCAAAA GCCGGTTTAA AGCCTGTCGT CCTTTCGGGA AAAGACGGAC TCGGTATAAT TAACGGTACA CCCGTAATGT CCGGTATCGG AGCCTTAGCC CTGCACGATG CAGAACAGCT TCTCAAGGCT GCAAACATGG GCGCTTCCTT GGTATTTGAA GCCTTTAGGG GAATTACCGC AGCCCTCGAC CCCAGAATCC ATAAATCCCG TCCGCACAAG GGACAGATTG ATACGGCCGC CTTTATTCTC AAAATGTTAA AGGGCAGTTC ATCTATCAAT ACAAGAGAAA ATGACGTTCA AGACCCCTAT ACGCTCAGAT GCGTTCCGCA AGTTCACGGA GCAAGTGCCG ATGCTATTGC CTATGTGCGC AAGGTTTTAG AGATAGAAAT CAATGCCGTA ACCGATAACC CGCTCGTCTT CCCGGACAAT CATGATGTTA TTTCAGGCGG AAACTTCCAC GGTCAGCCCA TAGCTATTAC TATGGACTTC TTGGGGATTG CCGTCAGCGA GCTTGCAAAC ATAAGCGAGC GCCGAATCGA ACGCCTTGTA AACCCGCAGT TAAACGGAGG CCTTCCTGCC TTCTTAATAG AAAACGGCGG AGTAAATTCA GGCTTTATGA TCCCTCAATA TACGGCGGCC TCCCTTGTTT CGGAAAACAA GGTATTGGCT CATCCTGCCA GTGTTGACTC CATTACCTCA TCAGGAAATA AGGAAGACCA CGTAAGTATG GGAACAACCG CTGCCCGAAA AATAACCGAA ATCGTTAAAA ACGTACGCCA TGTTCTTGCT ATTGAGTGGC TTACGGCTGC TCAAGCCTGC GATTTAAGGG GAGTAAAAAA GTACGGCAAG GGAACAGGAG AGATGATGAA GCTTATTCGA AAGCATATCT CCAAGGTTAC CGAAGACCGC ATTCTTTATA ACGACATTAT GAAGGCTCTT GAGATTATTT CAAATGATGA AAACATTGAC ATGATTGAAA ATGCTGCTAA GTAA
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Protein sequence | MKVKPVTVTG SSLTIEDVVA VARHGAEVKL SADAKKRIKD SKKIVDDIVK SGKPTYGIST GFGELSTVTI TKDQNGALQR NLILSHACGV GNPFPEDIVR AIMLLRLNTH ASGFSGVTPS VPDILVDMLN KGVIPYVPEK GSLGASGDLA NLAHIALVMI GEGKAYYEGK LMEGKAALAK AGLKPVVLSG KDGLGIINGT PVMSGIGALA LHDAEQLLKA ANMGASLVFE AFRGITAALD PRIHKSRPHK GQIDTAAFIL KMLKGSSSIN TRENDVQDPY TLRCVPQVHG ASADAIAYVR KVLEIEINAV TDNPLVFPDN HDVISGGNFH GQPIAITMDF LGIAVSELAN ISERRIERLV NPQLNGGLPA FLIENGGVNS GFMIPQYTAA SLVSENKVLA HPASVDSITS SGNKEDHVSM GTTAARKITE IVKNVRHVLA IEWLTAAQAC DLRGVKKYGK GTGEMMKLIR KHISKVTEDR ILYNDIMKAL EIISNDENID MIENAAK
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