Gene TDE0448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0448 
SymboldeoC 
ID2740430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp505936 
End bp506586 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content39% 
IMG OID637159320 
Productdeoxyribose-phosphate aldolase 
Protein accessionNP_971062 
Protein GI42525964 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0274] Deoxyribose-phosphate aldolase 
TIGRFAM ID[TIGR00126] deoxyribose-phosphate aldolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000718751 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAA ATAAATATAT AGATCATACC CTTCTTAAAC CGACAGCTTC CGAAAAGGAT 
ATAATCAAAA TTTGTAATGA AGCAAAAGAG TATCATTTTG CTTCCGTTTG TGTAAATCCT
TGCAATGTTT CATTGGTGAG AAAGGAGCTG AAAGGTTCCG ATGTAAAGGT CTGCAGCGTT
ATTTCTTTTC CCTTTGGGGC ATCTTCAACG GAGGTAAAAG TAGAAGAGGC TAAAAAGGCA
ATTGAAGCCG GTGCTGAAGA GATAGACATG GTTATAAATG TAGGGAAACT TTTAGAAGGA
GATTTGGAAT ATACTCAAAA TGAAGTGAGT GCCATAACAA AGGCCTGCCA TGAAAAGAAT
GTTCTTCTTA AAGTAATTGT CGAAACCTGT TATCTTGAAG AAAAAAATAT TGCGGATATT
TGTGCAATTA TCGAAAAGGC CGGGGCGGAT TTTATAAAGA CCTCGACAGG CTACGGCTCC
CGCGGGGCTT CGGTTGAAGA TATAAAACTA TTTAAAAAAT ACTTAAAAAA AGATACGAAG
ATAAAAGCTT CCGGCGGGGT GCGCACCCGT GAAGATGCGG AAACCTATAT CGGTTTGGGC
TGTTCAAGGA TAGGAGCTAG CAGCGGTATA GCAATAGTTA CCGGCAAGTA A
 
Protein sequence
MELNKYIDHT LLKPTASEKD IIKICNEAKE YHFASVCVNP CNVSLVRKEL KGSDVKVCSV 
ISFPFGASST EVKVEEAKKA IEAGAEEIDM VINVGKLLEG DLEYTQNEVS AITKACHEKN
VLLKVIVETC YLEEKNIADI CAIIEKAGAD FIKTSTGYGS RGASVEDIKL FKKYLKKDTK
IKASGGVRTR EDAETYIGLG CSRIGASSGI AIVTGK