| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0445 |
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| Symbol | |
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| ID | 2740427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 499884 |
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| End bp | 501164 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637159317 |
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| Product | amino acid permease |
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| Protein accession | NP_971059 |
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| Protein GI | 42525961 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000397922 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAATA AAGGTAAATT AGGGCTTTTA AGTATTTGCC TTCTTGGAGT AAATGCCATT
GTCGGTACCG GAATATTTTT GCTTCCGGGA AAGGCCGCCA AATTGGTCGG TGTATCGAGT
ATCGGAGTTA TTTTATTCGA TGCCGTTTTG GTTATTTTGA TTGCACTTTG TTTTGCTGAA
GCAGGAGGCT TGTTTAAAAA GAACGGCGGT CCTTATGTTT ATGCAAAAGA AGCCTTCGGC
GAATTCGTCG GTTTTGAAGT AGGCTTTATG AAATGGGCAA TAATGGTTAT TGCTTGGGCT
GCAATGGCTG TAGGTTTTCC CACAGCGTTA GGAAGTGTAT TTCCTTTAGC AGCAACACCT
TTTTGGCGAA GCGTTATAGC CGTAGCTATT CTTTTGTTTT TAGGATTGAT GAACATTGCT
GGAGTACGAA TTTCAAAAAT CGTAAACAAT GTTATTACAA TCGGAAAATT GGTGCCCCTT
ATCTTCTTTA TTCTTTTAGG TATCTTTTTT ATAAAAGGCG ATAATTTTCA ACCTATGCAG
TCGGTAGGTG CCTTAACTAC AACGTCTTTC GGAGCAGCTG CTCTTTTAAT CTTTTATGCC
TTTACGGGGT TTGAATCTAT TGCCGTTGCC GCTGAAGATA TGGATAAGCC TGAAAAAAAT
GTTCCTCTTG CTATTGTTTT GGTAATCAGC GGTGTTTCCG TTTTTTATAT ACTTATTCAA
GTAGTTGCTA TAGGTATTTT GGGTGATGGA CTTACAGCAA GTGAAGCTCC TGTTGCAGAT
GCTGCCGCAA AGTTTTTAGG CCCCGTTGCA AAAGCCGTTG TTACAACCGG AACCTTGGTT
TCAATAGGCG GAATAAATGT TGCTTCTTCT TTCTTAGCTC CTCGAAGTGC CGTAGCTCTT
GCCGACGACG GTTTTTTACC CAAGTTTGTA ACTAAAAGAA ATAAAAAAGA TGTTCCCTAC
ATTTCGGTTA TTTTAACAAC CGCCTTGACA GCCTTGGTTT GCTTAACGGG CAGTTTTTCA
AAACTTGCCG CAATTTCGGT TGTTTCCCGC TTTGCTCAAT ATATACCGAC CTGTCTTGCA
ATCTTAGTAT TCAGAAAACG CGGTATGAAA GGCTCTTTTA GAATTCCCGG TGTTTATGTT
GTTTCTTTTT TGGCGGTAGG AATAAGCCTT TGGCTTTTAT ATAATTCAAG CTGGGACAAG
ATTTTATTCG GTTTAGGCGG TCTTGTAGTC GGAGCCGTTT TTTACGTTAT AATGAAACTT
ACACAGAAAA AAGCTAACTA A
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| Protein sequence | MENKGKLGLL SICLLGVNAI VGTGIFLLPG KAAKLVGVSS IGVILFDAVL VILIALCFAE
AGGLFKKNGG PYVYAKEAFG EFVGFEVGFM KWAIMVIAWA AMAVGFPTAL GSVFPLAATP
FWRSVIAVAI LLFLGLMNIA GVRISKIVNN VITIGKLVPL IFFILLGIFF IKGDNFQPMQ
SVGALTTTSF GAAALLIFYA FTGFESIAVA AEDMDKPEKN VPLAIVLVIS GVSVFYILIQ
VVAIGILGDG LTASEAPVAD AAAKFLGPVA KAVVTTGTLV SIGGINVASS FLAPRSAVAL
ADDGFLPKFV TKRNKKDVPY ISVILTTALT ALVCLTGSFS KLAAISVVSR FAQYIPTCLA
ILVFRKRGMK GSFRIPGVYV VSFLAVGISL WLLYNSSWDK ILFGLGGLVV GAVFYVIMKL
TQKKAN
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