| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0444 |
|---|
| Symbol | |
|---|
| ID | 2740426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 499106 |
|---|
| End bp | 499831 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637159316 |
|---|
| Product | glutamine amidotransferase class I |
|---|
| Protein accession | NP_971058 |
|---|
| Protein GI | 42525960 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2071] Predicted glutamine amidotransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000517 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC CGCTTATAGG AATTACAGGC AGCTGCCTCT ATGAAACCTC ACAAAGTCTT
TTTGCAGGTT ATGAAAGAAT GTACACCAAT GCCGACTATG TGAATTCGGT GCTGGCTGCG
GGAGGAGTTC CCCTTATGCT CCCTATAATT GATGACGAAG ATGCTATTCA AAGACAGCTT
GAAAATCTTT CAGGGATTAT CATTATGGGC GGGCATGATG TCGAGCCTCA TTTTTTTAAT
GAGGAGCCGC TTTCCTGTCT TGGAGAAATT CTTCCTAAGA GGGATGTTTA CGAACTGAGC
CTTATCAAAG CAGCTAAGGC TTTAAAAAAG CCTGTTTTGG GGATATGCAG GGGAATGCAG
ATTTTAAATG TTGCCTTCGG CGGCTCACTT TATCAAGATC TTTCACTCAT AAAAAGAGAT
ATTCAAATAC AGCATGTTCA AAAAGCCCGC CCGCAGGAAC GCACTCATTC TATCAAGACC
GAAGCTGCTT CAATTATGCA AAAAGTTTTC GGCAAGGAAG ATATGGTTAA TTCTTATCAT
CACATGGCTG TAAAAGACCT TGCAAAGGAT TTTAAGATTA CGGCTTATGC TCCTGACGGT
GTGGTTGAAG CCATAGAATA TACGGGAGAA GGTTTTATAA TGGGTGTTCA GTTTCATCCT
GAAATGATGG CGGCCGTACA TAAGGCGTCA TTGGATCTGT TTAAAGAATT TATAAATCGT
TGTTAG
|
|---|
| Protein sequence | MKKPLIGITG SCLYETSQSL FAGYERMYTN ADYVNSVLAA GGVPLMLPII DDEDAIQRQL
ENLSGIIIMG GHDVEPHFFN EEPLSCLGEI LPKRDVYELS LIKAAKALKK PVLGICRGMQ
ILNVAFGGSL YQDLSLIKRD IQIQHVQKAR PQERTHSIKT EAASIMQKVF GKEDMVNSYH
HMAVKDLAKD FKITAYAPDG VVEAIEYTGE GFIMGVQFHP EMMAAVHKAS LDLFKEFINR
C
|
|---|
| |