| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0431 |
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| Symbol | |
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| ID | 2740577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 486560 |
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| End bp | 487684 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637159303 |
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| Product | LysM domain-containing protein |
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| Protein accession | NP_971045 |
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| Protein GI | 42525947 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00107019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAACG GCGGTAAACA GACATCTAAA GATGAGAATG AAGGAGATTA TACAGTAAAA
CAAGGAGATA CTTTAAGTAA GATAGCACGG GAACACTATC CTGATGCAAG CACTAAGGAG
TTATCCGAAA AAATTAAAGA AATTGCAAAA AACAGCGGTA TAGAAAACCC TGACCTGATA
CGGCCGGGGC AAAAAATAGT ATTTGGCGAT AAAGAAAGCA GCGTATCGTC GTCTTCCTCT
ACTCCAAGTG AACCGTCGCA GACTCAAACG GATTCTTCTT CGACAACATC ACAGGAAGAA
TATGGGGACA AAACCGATTA TTCGGAAAGA GGGGATACCG AACCGGATAT GACGGAGAAT
ACTCCAAATA AACAGGAAAA ATCCTATGGT AAAGAAAAGC AAGTAAACGG AAATGGGCAA
CATTCATCAG ACGAGAAAAA CTCAAACAAA CAAGAGTCAT CATTTGGGAT TTCTATCGCA
GATATTAAAA CAAAAAAGGG CTTTTTTAAA CAAGATAATA AATTAAAAAA AATAGATAAT
GATAAAACCA TAGATACTTC AGAAAAATTT AAAAATCAAT TAAATAATCT AAAAACAATC
ACACAAGATA TAATGGATGG TGAGCATAAA AATAAGAATG AATATGATCC CGATGCCAAT
ATTTTTAAAG GCCAAGATCC AAAATCTCTA ACCAATACCA TAGTTAATTT TGTAACCAAC
CATTATGAAA AACTTCCTCT ACTGGGAGGG TTTGGCCTCA TTGCAGGCGC TTTGTATTTA
GGCAATGAAA CGGTAAGAAA CGGAATTAAC TCTCTGATAG AGACCAGGGG TACAATTACC
AAGCCCTTAA ATGAAAATTC AAATTTTTCA TTTAGCTCCT TACCGGGAAC ATCTAACACA
AAAGAGGGTG AAACTGTATA TTATGTACAA CCTCAGTTTG GAATAGATAT AAAAACACCT
TTTAAATCAG GTGCGGGAGC AGGTAATATT TATGTAGAAA ACAGAATAAG AACTAATTTG
GATGTATATT CGACTAAAAC AGGACCATTT CCACAACTGA CCGGAAAAGA TAACAATCCT
TTTTCAACTC TGCAAGTTGA CATCGGTGTA CAAATCCAAT ACTAA
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| Protein sequence | MINGGKQTSK DENEGDYTVK QGDTLSKIAR EHYPDASTKE LSEKIKEIAK NSGIENPDLI
RPGQKIVFGD KESSVSSSSS TPSEPSQTQT DSSSTTSQEE YGDKTDYSER GDTEPDMTEN
TPNKQEKSYG KEKQVNGNGQ HSSDEKNSNK QESSFGISIA DIKTKKGFFK QDNKLKKIDN
DKTIDTSEKF KNQLNNLKTI TQDIMDGEHK NKNEYDPDAN IFKGQDPKSL TNTIVNFVTN
HYEKLPLLGG FGLIAGALYL GNETVRNGIN SLIETRGTIT KPLNENSNFS FSSLPGTSNT
KEGETVYYVQ PQFGIDIKTP FKSGAGAGNI YVENRIRTNL DVYSTKTGPF PQLTGKDNNP
FSTLQVDIGV QIQY
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