| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0421 |
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| Symbol | |
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| ID | 2739585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 473556 |
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| End bp | 474842 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 637159293 |
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| Product | putative lipoprotein |
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| Protein accession | NP_971035 |
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| Protein GI | 42525937 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01781] Treponema denticola clustered lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000214664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA ACAAATTAAA ACTTATCATT ATCTTAATAT TAGCGGTTCT TTTATTTTCG
TGTTCTAAAG AGGTTAAAGA ACAGAACTCT GCAGAGACAA AAGTTGAATC ATCTGCAAAA
ATTGAACCGA AAGAAAATGA ATTTTTATCA AAGCCCGAAT ATAACACGCA CGTGAAGAGT
CCTGAACAAA TTAAGGAATT AGAAGAAAAA TACAAAAGAA GTGAAGCATA TGAAGAAAAA
CTTAAACAGC TTGGAGCCGA ACTGGATAAG AAAGAAAAAA TCCTAAACTA TAAATTCCCT
ACAGGTATTA CTATTGATGA ATTGGCACAG CAAAAGGCTC CGGTATTGTA TAGTCCGGCA
GATAACCTTG AGTTTATTCA TTTTTATGAG ATAAAAAAAG ATGGTGAATT TTGCTATTGT
AAATATAAAG CGCCTACTCA AAACGGAGGA ACTCTTGATT ATCAGGTTAC CTATAAGTGG
TACAACATTG AACAGATGTA TCTTCCTCTC TCTTATAATC TTTTAAGTGA GAACAACATG
GGAAGAATAA ATGAAGAGCT TATAGAAAAC CAAGTACACG GTTCTGTATA TAGTATGGAA
AACGATGAAA AAAAAGATGA AATGATAAAA CTGTTTGAAG ATTACGAAAA CACACAATAT
CCTTTATTTA AGGAAGTTGT GCATACAGAT TGGGATACGG GAGTCAAAAC TATAGGATAT
AAACAATATG ATATGAGAAT CCTTGATTAT GTAAAGGGGA ACTTTACAAA CTCAGGATAT
GATGAATACT TTGTTATGTT TTATGAAGAT GATCCTGATC CGGAAATATA TGATCAATTT
ATAGAAAGGG TGAGATGTTT TGTAGTTTCT GAAGGCAAGA TAATAAGTGA CTACTATATT
AGTAATTCCG GCGGTTTTTT TTATCCAGGT CTTAGTAATG ATAAACTTTC TGAAGTGGAA
GCTTTCGGGT TTAAATTTTC ACAAGGGTGG ATAGCCGACT TTAATCAAAA TGGAATAAAT
GAAATATATC TTGCTGCTTT TTTTAATATA GAAGGCGGCG GGCTATTAAT GGTTGAATAT
AATGATGGAT CTTTTGTTAC TGGTTATGTA TATGGTGATC GTTACGATAT AGTATCTGTT
GATTGGTATA AAAAAATAAT TATAATAAAA GATAAGTCGG GAAACGGTGA ATGGATAGAT
GATTATCAAT GGAATGATAC TTTAAAAGAG TTTATTCTAT ATAAAGAGCA AATATTAGGA
GGATTAAGAA ATGAAAAAAA TTATTAA
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| Protein sequence | MKKNKLKLII ILILAVLLFS CSKEVKEQNS AETKVESSAK IEPKENEFLS KPEYNTHVKS
PEQIKELEEK YKRSEAYEEK LKQLGAELDK KEKILNYKFP TGITIDELAQ QKAPVLYSPA
DNLEFIHFYE IKKDGEFCYC KYKAPTQNGG TLDYQVTYKW YNIEQMYLPL SYNLLSENNM
GRINEELIEN QVHGSVYSME NDEKKDEMIK LFEDYENTQY PLFKEVVHTD WDTGVKTIGY
KQYDMRILDY VKGNFTNSGY DEYFVMFYED DPDPEIYDQF IERVRCFVVS EGKIISDYYI
SNSGGFFYPG LSNDKLSEVE AFGFKFSQGW IADFNQNGIN EIYLAAFFNI EGGGLLMVEY
NDGSFVTGYV YGDRYDIVSV DWYKKIIIIK DKSGNGEWID DYQWNDTLKE FILYKEQILG
GLRNEKNY
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