Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0410 |
Symbol | |
ID | 2740156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 462193 |
End bp | 463059 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637159282 |
Product | M48 family peptidase |
Protein accession | NP_971024 |
Protein GI | 42525926 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000410475 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAA AATTCGGATT ATTTGTAATT ATAAGTTTAA TACCGGTAGT TGTTCTATCT TGTGCCCTAT TGGGGAGTTT GGATGATCCT CTTGCCTTTA CAAAAAATGC TATTGATGCT GCAGCCCCTA TTGTTGAAGC CTCGAAGCCT ATTGAAAATG AGGAAGAGTA TTATATAGGC AGGGAAGTGG CTGCCATTAT TTTAAGCAAT TATAAACTCT ACAGGAACAA GCCATTGGAA AACTATCTTA ACTTGATCTG TATGACCTTG GTTTTGAATT CCGACGTACC CGAATCCTAT AACGGCTATC ATGTTGCGAT ATTGGATACG GACGAAATAA ATGCCTTTGC AACACCCGGC GGTCATGTGC TGGTTACTAA GGGACTCTTG TCTTGTGCGG ATTCCGAAGA TGCTCTTGCC GGTGTCATAG CCCATGAGCT TGGGCACATT CAACTAAAGC ACGGTATAGG AGCCATTAAG GCTAATAGAA TAACGGCTGC CGCTGTAGAA AGTTCGGCAA CAATGGCTGT AGGTTCCGAG AAAAAAGCGG AACTTAAATT TTTAGAAGAT GCATCAAAAG AAATCGTAAC AACCTTGGTA AATTCTGGTT ATTCTAAAAG CCAAGAATAT GATGCAGACC GTTTTGCCGT CAAGCTGATG GCAAGGGCGG GATATGATCC CAATGCTATG ACCGAAATGC TTAAAATTAT GAGTGAAAAA CAGAAGCATG ACAGTAGAGG CTTCGGCAAA ACTCACCCAT CAGCAGTTTC CCGTATAAAA TCCGTAGAAA AGGAATCGAA AAAGCTTGCA GGCGATTATA ACCGTCCAGC GAGGCTTAAC CGCTATCAAA AGAACAAACT GAAATAA
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Protein sequence | MKKKFGLFVI ISLIPVVVLS CALLGSLDDP LAFTKNAIDA AAPIVEASKP IENEEEYYIG REVAAIILSN YKLYRNKPLE NYLNLICMTL VLNSDVPESY NGYHVAILDT DEINAFATPG GHVLVTKGLL SCADSEDALA GVIAHELGHI QLKHGIGAIK ANRITAAAVE SSATMAVGSE KKAELKFLED ASKEIVTTLV NSGYSKSQEY DADRFAVKLM ARAGYDPNAM TEMLKIMSEK QKHDSRGFGK THPSAVSRIK SVEKESKKLA GDYNRPARLN RYQKNKLK
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