Gene TDE0386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0386 
Symbol 
ID2740318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp437395 
End bp438411 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content42% 
IMG OID637159258 
ProductABC transporter, periplasmic substrate-binding protein 
Protein accessionNP_971000 
Protein GI42525902 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000551212 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TTATTTTTGC TGCACTATTT TTATTGCTTG CAAGTACCCT TGTGTTTGCA 
GCCGGTTCTT CCGAAAAAGA ATCAAAGGAT CTTTCGGGAA AAACATTGAA CGTGGTTGCA
ACAAGTGCTT ACAAGGAGCT CTTTGATGCA TTTACTGCAA AGACAAACGT AAAGGTTGAA
TTTCTTTCTA TGTCAAGCGG AGAGGTTTTA GCAAGAACAA GGGCAGAAGG AAAGTCCATG
GCCGATGTTT GGTTCGGAGG CGGACTTGAT GCCTTTATGG CAGCAAAGGC CGACGGACTT
TTGGAAAACT ATGTTTCTCC CAACTCAAAG GATATTCCGG CTCAATATAA GGACACTGAC
GGAGCTTGGA TTGCAAAAGG AATTACCGTT GTAGGCTTTA TCGGAAACAA GGATGTCTTA
GCCGAGAAAA AACTTCCCAT GCCCAAAACC TGGGCAGAGC TTGCAGACCC CAAATACAAG
GGCGAAGTTA TTATGAGCGA TCCTGCAATT TCGGGTACAA ACTACGGAGC GGTAAAAGGC
TTACTCGATC TTTTCGGCGA AGAAAAAGGC TGGGATTATT GGAAAAAAAT AAACGCCAAT
ATTCCGTTCT TGGGAAAGAG AGGAAAGGAT CCGCAAGAAA AAACGGCTCA AGGCGAATTT
GCAGTTGGCA TTATTCCTGC CGATGGAAAA GCTTTTAAAC TTGCCGACGA TAAAAACCTA
ACTGTGGTAT ATCCCGAAGA CGGAATTCCG TGGGTACCGG AAGGAACTGC AATCTTTAAA
TCATGTCCGA ATCTCGATGC GGCAAAGGCT TTTATCGACT TTATGCTTAC AAAAGAAGCT
CAGGAAATTA TTGCAAGGCT TGACGGAAAA GATTCCGCTC AAATTGTAAA GCCTGGTGTT
AAGGGGCTTT CATTAGGCTT ACCTAAAGAT AAGCTTATAA AGGAAGATTT AAGCAGCTTC
GGAAAAGACA GACAAAGAAT CTTAGATAAA TTTGCTTCGT TAAGATCGAA AAACTAA
 
Protein sequence
MKKIIFAALF LLLASTLVFA AGSSEKESKD LSGKTLNVVA TSAYKELFDA FTAKTNVKVE 
FLSMSSGEVL ARTRAEGKSM ADVWFGGGLD AFMAAKADGL LENYVSPNSK DIPAQYKDTD
GAWIAKGITV VGFIGNKDVL AEKKLPMPKT WAELADPKYK GEVIMSDPAI SGTNYGAVKG
LLDLFGEEKG WDYWKKINAN IPFLGKRGKD PQEKTAQGEF AVGIIPADGK AFKLADDKNL
TVVYPEDGIP WVPEGTAIFK SCPNLDAAKA FIDFMLTKEA QEIIARLDGK DSAQIVKPGV
KGLSLGLPKD KLIKEDLSSF GKDRQRILDK FASLRSKN