Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0386 |
Symbol | |
ID | 2740318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 437395 |
End bp | 438411 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637159258 |
Product | ABC transporter, periplasmic substrate-binding protein |
Protein accession | NP_971000 |
Protein GI | 42525902 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000551212 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TTATTTTTGC TGCACTATTT TTATTGCTTG CAAGTACCCT TGTGTTTGCA GCCGGTTCTT CCGAAAAAGA ATCAAAGGAT CTTTCGGGAA AAACATTGAA CGTGGTTGCA ACAAGTGCTT ACAAGGAGCT CTTTGATGCA TTTACTGCAA AGACAAACGT AAAGGTTGAA TTTCTTTCTA TGTCAAGCGG AGAGGTTTTA GCAAGAACAA GGGCAGAAGG AAAGTCCATG GCCGATGTTT GGTTCGGAGG CGGACTTGAT GCCTTTATGG CAGCAAAGGC CGACGGACTT TTGGAAAACT ATGTTTCTCC CAACTCAAAG GATATTCCGG CTCAATATAA GGACACTGAC GGAGCTTGGA TTGCAAAAGG AATTACCGTT GTAGGCTTTA TCGGAAACAA GGATGTCTTA GCCGAGAAAA AACTTCCCAT GCCCAAAACC TGGGCAGAGC TTGCAGACCC CAAATACAAG GGCGAAGTTA TTATGAGCGA TCCTGCAATT TCGGGTACAA ACTACGGAGC GGTAAAAGGC TTACTCGATC TTTTCGGCGA AGAAAAAGGC TGGGATTATT GGAAAAAAAT AAACGCCAAT ATTCCGTTCT TGGGAAAGAG AGGAAAGGAT CCGCAAGAAA AAACGGCTCA AGGCGAATTT GCAGTTGGCA TTATTCCTGC CGATGGAAAA GCTTTTAAAC TTGCCGACGA TAAAAACCTA ACTGTGGTAT ATCCCGAAGA CGGAATTCCG TGGGTACCGG AAGGAACTGC AATCTTTAAA TCATGTCCGA ATCTCGATGC GGCAAAGGCT TTTATCGACT TTATGCTTAC AAAAGAAGCT CAGGAAATTA TTGCAAGGCT TGACGGAAAA GATTCCGCTC AAATTGTAAA GCCTGGTGTT AAGGGGCTTT CATTAGGCTT ACCTAAAGAT AAGCTTATAA AGGAAGATTT AAGCAGCTTC GGAAAAGACA GACAAAGAAT CTTAGATAAA TTTGCTTCGT TAAGATCGAA AAACTAA
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Protein sequence | MKKIIFAALF LLLASTLVFA AGSSEKESKD LSGKTLNVVA TSAYKELFDA FTAKTNVKVE FLSMSSGEVL ARTRAEGKSM ADVWFGGGLD AFMAAKADGL LENYVSPNSK DIPAQYKDTD GAWIAKGITV VGFIGNKDVL AEKKLPMPKT WAELADPKYK GEVIMSDPAI SGTNYGAVKG LLDLFGEEKG WDYWKKINAN IPFLGKRGKD PQEKTAQGEF AVGIIPADGK AFKLADDKNL TVVYPEDGIP WVPEGTAIFK SCPNLDAAKA FIDFMLTKEA QEIIARLDGK DSAQIVKPGV KGLSLGLPKD KLIKEDLSSF GKDRQRILDK FASLRSKN
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