Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0347 |
Symbol | dmcA |
ID | 2741243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 388140 |
End bp | 390329 |
Gene Length | 2190 bp |
Protein Length | 729 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637159219 |
Product | methyl-accepting chemotaxis protein DmcA |
Protein accession | NP_970961 |
Protein GI | 42525863 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGAAA AAGTTACATT ACCCGCCACC CAAAAAACTA AGGACGGCGC TATTAGAAAA AAATCGACAT CTATTACTGT ACGCCTTTTA CGGGCAATTA CAATAACAAT TATTTCAATC GTAGCCGTTA TTTGTGCGGT TGTGGGCTTC CAACTATATA AAAAGAACAT CGCCCAGTTC GATGAATTTA CTGCACAGCA ATTTTCCAAT ATTGAGAGGT CCATAAACCT TTTTATCCGG AACGGAAAAA ATACCGTTAC TATGCTTGCG GAAAACCCTA CCGTAAAAAA TGCCGACGAA ACACTTTATA ACTATACAGG AGAAAGAAAA GACATTGTGT ATACGCATAA CGGCAAAACG GAACAGGATA TAACAGCACT CTTCGTTCGT ATGGACAAAA ACTATGAAGA GTTTAAAGAA ATATATATGG GCACGCGCTG GGGAGGATTC GTAAGTTCGT TATCAGAGGA AGATGAACAA GGATTTGACC CGCGCACCAG ACCTTGGTAT AAGGCTGCAG CAGCCGCAAA CGGAGAGGTC ATAATAACCC CGGTATATAT ATCAACAATA TCAACAGGCG GCAGCCCCGT CGTAGCATTG GCTCAGGCAA TAAAAGATCC TGAGGGTGCT TTTTTAGGCT GTATAGGTCT TGACTTAAAT CTTACGGATT TGGCTTCACG CGTCAGCAGC ATCCGTATCG GCAAGACGGG CTATTGTATG CTTATGCAAA ACGACGGATT AATTTTAGCC GACCCAAAAC ATGCAGACTC CAATCTAAAA ATATTAAAAG AAACAGGTAT TCCTGCCTTT AACGAAATAG ACAAAATGAA AGAGGGTTCG GCTTTTATTA TGCTTGACGG AAAAACATGG AAAGTATCGG TCTTTTCACT TCCCGAAGTT AATTGGAAAG TAGCTCTTTT TATCGAACAA AACGAAATAC TTTCGCTTTT TTATACACTC TTAAAAAATA TGATTCTTAT CGGCCTTTTT ATGTTTGTCC TGTATTTTAC ATTAGCCTTT ATTTTTGCAG GTGCTCTTAA ACGCTATTTT AAGCGGCTTG AAATCGTTTT CGGCAAAATT GCATCGGGTG ACCTTACCGA CAGGCTGGCA GTAAAAAAGA ATAACGAAGT CGGACGTATT ATGATGAACC TCAATACCGC AATCGAAAAT AATCATACAA TGATATGCCT TTTAAAAGAT GAAGCCGATA AAATGAACTC TATCGGGTCT CAGCTGTCGA GCAGTATGGA AGAAACGGCA GCCGCAATTA AACAGATAGG AGAGAACGTC AAAGGCGTAA AAGAAAAAGC TATGTCGCAG GCTGCCGGCG TTACCGAAAC CGTTGCAACT GTGGAGCAAA TCAACGGACG GCTTAGCCGG CTCGTTTCAA GTATCGAAAT GCAGACCGAA AGTATCAACG AATCTTCTGT GGTCATTACG CGCATGGCGG AAAACACCGT TAAAATAGCT AAAACGCTTG ACCAAAATAA TGAACTGATC AAAACAGTCT ACGGACAAAC CAAGGTCGGT AAAGACGGGG CAAGAACTGC AAATGAGATT GTAAAGCAAA TCGCCGAAAA ATCGGCCTCT CTTCTTGAAG CGAGCCAAAT CATTCAAAAT ATTGCGAGTC AAACCAACCT TTTGGCAATG AATGCCGCAA TAGAGGCAGC CCATGCAGGT GAATCCGGTA AGGGCTTTGC CGTTGTCGCT GACGAAATTA GAAAACTTGC TGAAGGTTCT AATTTGCAAG GAAAGCAAAT TGCGGCTGTT ATAAAAGAGA CGACTGAAAT TATCCATGAC ATTACCGAAG CCGGTTCTCG AGCGGAAAAG ACCTTTATCG ATGTATACAA CTTGGTCAGC CAAATCTCCG AAAAAGAAGA TTCTATTTTG GAAGTGATGC GAGAACAGGA AGAAAACGGA AAACATGTAC TTGATGCCAT TAAAAGAATA AATGACGTAA CAAGCGAAAT TGACTCAGCC TCCGCCGAAA TGCTTGAAGG CGGCAATCAA ATTGGGCAGG AAATGCAAAA GCTTGCCGAA ATAACACTCG AAACCACCGA TAGTATGAAC GAAATAGCTT CAGGAGCCGA TCAAATTACC ATTGCAGTCA AAGAAGTAAG CGACATTACG CAGAAAAATA AAGCAAGTAT TGAAAATTTA TCCAATGAGG TTTCTAAATT TAAAGTATAA
|
Protein sequence | MKEKVTLPAT QKTKDGAIRK KSTSITVRLL RAITITIISI VAVICAVVGF QLYKKNIAQF DEFTAQQFSN IERSINLFIR NGKNTVTMLA ENPTVKNADE TLYNYTGERK DIVYTHNGKT EQDITALFVR MDKNYEEFKE IYMGTRWGGF VSSLSEEDEQ GFDPRTRPWY KAAAAANGEV IITPVYISTI STGGSPVVAL AQAIKDPEGA FLGCIGLDLN LTDLASRVSS IRIGKTGYCM LMQNDGLILA DPKHADSNLK ILKETGIPAF NEIDKMKEGS AFIMLDGKTW KVSVFSLPEV NWKVALFIEQ NEILSLFYTL LKNMILIGLF MFVLYFTLAF IFAGALKRYF KRLEIVFGKI ASGDLTDRLA VKKNNEVGRI MMNLNTAIEN NHTMICLLKD EADKMNSIGS QLSSSMEETA AAIKQIGENV KGVKEKAMSQ AAGVTETVAT VEQINGRLSR LVSSIEMQTE SINESSVVIT RMAENTVKIA KTLDQNNELI KTVYGQTKVG KDGARTANEI VKQIAEKSAS LLEASQIIQN IASQTNLLAM NAAIEAAHAG ESGKGFAVVA DEIRKLAEGS NLQGKQIAAV IKETTEIIHD ITEAGSRAEK TFIDVYNLVS QISEKEDSIL EVMREQEENG KHVLDAIKRI NDVTSEIDSA SAEMLEGGNQ IGQEMQKLAE ITLETTDSMN EIASGADQIT IAVKEVSDIT QKNKASIENL SNEVSKFKV
|
| |