| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0333 |
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| Symbol | |
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| ID | 2741549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 371788 |
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| End bp | 373143 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637159205 |
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| Product | MATE efflux family protein |
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| Protein accession | NP_970947 |
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| Protein GI | 42525849 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0189347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGATA AAAGAGAACA TTTGATTTCA GGTAATATGT TCAAGTTGAT GCTTGAGCTC
AGCATTCCGG GCATTATCGG AATGTTTGTA ATCAGCTTAT ACAGCTTTGT GGATGCAATA
TTCGTAGGAA GATATGTAAG CAGCGTAGCT TTAGGAGCAG TCAGTTTAGC CTATACATTT
ACACTGATAA ATAACGGCAT TGCCGTTTTA GTAGGTATAG GATCCGCTTC GGTTCTTTCG
CGGGCGGTAG GAAGAAGCGA CCAAGAAACC GTTGATTCCA TTATGGGAAA CGTCCTTTTG
TTGACGCTTC TTTTTTCATT GGGAACTATG ACAATCGGAT TAATTTTTGC GCCTCAACTT
TTGATTCTTA TAGGAGCCGA AGGAGAAATG CTCCGATTGG GAGTAAGCTA TCTGCGGATT
GTATATATCG GTTCAGTCTT TGTAAACTTC GGTCAAGCAG CCAACATGGT TATGAGAGGA
GAAGGCCGAA TGGGGCTTGC CATGCTTTTG ATGGGTATAA GTGCCGTACT AAATATTATT
TTGGATGCGG TCTTTGTAAT TGTTTTAAAA AAGGGACTTG AAGGCACCGC TATAGCAACC
GTAATATCTC AAGTGGTTCT TGCAATTTGT AATTTTTGTT ACTTCGCATT CTTCAGTAAA
AACGTTAAAT TCAAACACTT TAAGCTTCAA AAAAGTATCG TAAAAGAAAC CCTTTCAATC
GGCTTTTCTG CAATGTTGAT GCAAGTTTTT GCTCTTTTAC AGCAGGCAGT TATGTATTCT
ACATTAAAAA GATACGGCGG AGAAGATCAG GTAATTTTGA TGGGTGCTTT TTTTAGATAT
ATGATGTTAT CCTTTATTCC TCTTTGGGGA ATAAGTCAGG GCTATCAGCC CTTTGCAGGA
ACCAATTTCG GAGCACAAAA ATTTGAAAGG GTAAAAAAAG GAACATTTCT TTTTTACGGT
TTCGGATTAT TTTTATCACT GATATTTTGG CTGGTATTTT TAATTATACC TGAACAGGTT
TTGGGTCTCT TTTTGAAAAA TAAGGAGCTT ATATCTTTAG GAAGAACGAA TGCAATGCTT
GCTATGTCTT TATTTCCTTT GTCGGCAATT ATGATTATCA ATTTAACCCT CTTTCAAGCT
TTGGGTAAAG CGAAATATGC AGGCATACTG GTAATTGCCC GCCAATTTTT ACTTTATATT
CCGGCCGTAT TAATTCTCCC CGTATTTTTT GGAACACGGG GAGTTTGGAT TTCAACCCCG
ATAATAGATA CACTGGTTAC GGTTTTATCT GCATTTATAG TGATTAAACT TTTTAAAAAA
GATTTAAGCC CTAAAGATAA ACCATTGAGT GCATAA
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| Protein sequence | MTDKREHLIS GNMFKLMLEL SIPGIIGMFV ISLYSFVDAI FVGRYVSSVA LGAVSLAYTF
TLINNGIAVL VGIGSASVLS RAVGRSDQET VDSIMGNVLL LTLLFSLGTM TIGLIFAPQL
LILIGAEGEM LRLGVSYLRI VYIGSVFVNF GQAANMVMRG EGRMGLAMLL MGISAVLNII
LDAVFVIVLK KGLEGTAIAT VISQVVLAIC NFCYFAFFSK NVKFKHFKLQ KSIVKETLSI
GFSAMLMQVF ALLQQAVMYS TLKRYGGEDQ VILMGAFFRY MMLSFIPLWG ISQGYQPFAG
TNFGAQKFER VKKGTFLFYG FGLFLSLIFW LVFLIIPEQV LGLFLKNKEL ISLGRTNAML
AMSLFPLSAI MIINLTLFQA LGKAKYAGIL VIARQFLLYI PAVLILPVFF GTRGVWISTP
IIDTLVTVLS AFIVIKLFKK DLSPKDKPLS A
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