| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0311 |
|---|
| Symbol | thyX |
|---|
| ID | 2740510 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 342956 |
|---|
| End bp | 343756 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637159183 |
|---|
| Product | FAD-dependent thymidylate synthase |
|---|
| Protein accession | NP_970925 |
|---|
| Protein GI | 42525827 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1351] Predicted alternative thymidylate synthase |
|---|
| TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0369902 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGATAAAG AATTTAAGGT TCTTGATAAG GGCTTTATCA GATTGGTAGA CTACATGGGA
ACTGATGCCC GCATAGTGCA GTCTGCCCGT GTTTCTTATG GGGAAGGGAC TAAAACCGTA
CGTGAAGATG CTGCTTTAAT AGATTATCTT TTGCGGAACA AGCACACCTC TCCTTTTGAG
CAAGTGGTTT TTACCTTTCA TGTAAAGCTG CCCATTTTTG TAGCCCGTCA GTGGATCAGG
CATAGGACTG CCCGCTTAAA CGAAATTTCG GGACGGTATT CTATCTTAAA GGCCGAGTTT
TATGTACCCG CCGGAAAGGA TATAGCTTTG CAAAGCAGCG ATAATAAGCA GGGCAGAATG
AATGAAGCAG TTCCTCAAGA CCTTCAAAAT GAAGTTATAA CTTCTTTACA AAAACAACAA
GAAGAAATTT ATGCAGGCTA CTCTAAATTA CTTGATAAAA ATATTGCGAG AGAGCTTGCA
AGAATAAACC TCCCTCTTTC CACTTATACC GAATGGTATT GGCAAATAGA CTTGCATAAT
CTTTTTCATT TTTTGCGGCT GCGTATGGAT GCTCATGCAC AAAAAGAAAT CAGAGACTAT
GCCGAAGTGA TGTTCGAGAT TTGTAAAACC GTAACCCCCC TTGCCTGTGC TTCTTTTGAG
CGGCATGAAA AAAACGGCGT AAACTTTTCG GCAGAAGAAC TTGAAGCTAT ACGTAATTTG
ATAGCCGGAA AAGACAGCGG CTTAAAAGGA AAAGAGCTTG AACGTTTTAA CGAAAAACTT
AAAAGCGGAA GACAGGTATA A
|
|---|
| Protein sequence | MDKEFKVLDK GFIRLVDYMG TDARIVQSAR VSYGEGTKTV REDAALIDYL LRNKHTSPFE
QVVFTFHVKL PIFVARQWIR HRTARLNEIS GRYSILKAEF YVPAGKDIAL QSSDNKQGRM
NEAVPQDLQN EVITSLQKQQ EEIYAGYSKL LDKNIARELA RINLPLSTYT EWYWQIDLHN
LFHFLRLRMD AHAQKEIRDY AEVMFEICKT VTPLACASFE RHEKNGVNFS AEELEAIRNL
IAGKDSGLKG KELERFNEKL KSGRQV
|
|---|
| |