Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0294 |
Symbol | |
ID | 2741385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 323563 |
End bp | 324300 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637159166 |
Product | TrkA domain-containing protein |
Protein accession | NP_970908 |
Protein GI | 42525810 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TTGCGATTAT GGGATTGGGT ACCTTCGGGG TACGAATGCT GGATGAGCTT ATAAAAATCG GGGCTGAGGT TATAATCATT GAGCAAAATA AAGACCTTAT TGAAATGTAT AAATCTAAAG CTTCTTCTGC AATTGTACTT GAAGAAATAA GCGAGCTTTC AGTACGCAAA ATTCTTCCCT CCAAGGTGGA TACGGTAATC GTAGACTTCG GCCGCAAGGT AGAGCTTTCA GTAATCAGCA CGACCATCTT AAAAAATTTA GGCATTGCAA ACATTGTTGT ACGAGCCCAA TCCGATGAAC ACGGAAGACT TTTAAAAACC GTCGGAGCCA CCAGAATAAT TTATCCCGAC AGTGAAGCGG CCAAAAGAAC AACCCCTATT TTAGCTGCCG ACCTCCTTCT TAAATTTATG CCTATTTCAA AAAACCTTGC CCTTGCCGAA GTCGGAGTAG AAGCACGATA TGTCGGTAAA AGCCTTGCCG AATCCAATAT CAGAAAAGAT ATGGGGGTAA ACATTATAGC CCGCCGAAAA AAAGAAAGCG AAGACTTTAT CTTTATGGAT GACCCTGAGT ATAAATTTGA AGAAGATGAT GTTCTTTTAG TTGTTGCCTC TGAAGAACAC ATCTATAATT TTTCCGGCGG AAAGATAAGC CTAAAAAATA ATTTAAAAAA AGATGGAGAG ATAAAACCGT CAATCTTTAA AAATCTTTTT TCTTCAAAAA AAGTATAA
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Protein sequence | MKKFAIMGLG TFGVRMLDEL IKIGAEVIII EQNKDLIEMY KSKASSAIVL EEISELSVRK ILPSKVDTVI VDFGRKVELS VISTTILKNL GIANIVVRAQ SDEHGRLLKT VGATRIIYPD SEAAKRTTPI LAADLLLKFM PISKNLALAE VGVEARYVGK SLAESNIRKD MGVNIIARRK KESEDFIFMD DPEYKFEEDD VLLVVASEEH IYNFSGGKIS LKNNLKKDGE IKPSIFKNLF SSKKV
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