Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0249 |
Symbol | |
ID | 2739674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 282679 |
End bp | 283242 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637159122 |
Product | flavoredoxin, putative |
Protein accession | NP_970864 |
Protein GI | 42525766 |
COG category | [R] General function prediction only |
COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000303002 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAA AATTAGATAT TACCGACGGA ATTTTTCCTA TGCCCGTATT AATGGTTGCT ACCTATAATG ATGATGGAAG CATAAATGTT ATGAACGCTG CATGGGGAAC TATGCAAGAA CGTTCCATTA TAGCTCTTAA TTTGACCGAA ACACATAAGA CAGTAAAAAA TATCAAGGCG AGAGGCGCTT TTACCGTTAG TATTGCTGAT GCTGCTCATG TACTTGAAGC CGACTACTTT GGTGTTGCTT CCGGCAATAA GGTTCCTAAT AAGCTGGAGA AGACCGGTCT TACCGCAAGC AAGGCGGAAA CCGTTGACGC TCCTGTTATA AACGAATTTC CGATTTGTCT GGAATGTGAA TTTATTGAGT ATCAGAATGA TAAATATGGT TGCGGTGTTA TAGGAAAGGT TGTCAATGTA ACTGCTGACG AAAGTGTTAT GCCGAATGGA AAGCTTGATA TGTCGTTAGT AAATGCCATA GCCTTTGATC CATATACACA CGGATATTAC AAAGTATCAG AGCGTGTCGG TGAAGCCTTT AAAGACGGTT TAAAGCTTAA ATAA
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Protein sequence | MRKKLDITDG IFPMPVLMVA TYNDDGSINV MNAAWGTMQE RSIIALNLTE THKTVKNIKA RGAFTVSIAD AAHVLEADYF GVASGNKVPN KLEKTGLTAS KAETVDAPVI NEFPICLECE FIEYQNDKYG CGVIGKVVNV TADESVMPNG KLDMSLVNAI AFDPYTHGYY KVSERVGEAF KDGLKLK
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