Gene TDE0231 details

Gene Information

• Locus tag: TDE0231
• Symbol: dnaN
• ID: 2739083
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 263980
• End bp: 265083
• Gene Length: 1104 bp
• Protein Length: 367 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 637159105
• Product: DNA polymerase III, beta subunit
• Protein accession: NP_970847
• Protein GI: 42525749
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog)
• TIGRFAM ID: [TIGR00663] DNA polymerase III, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0000000874025
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATAA GTTTTGACAG AGACACTCTT TTAAAAGAAA TATCCATCGC TCAGGAAATT 
ATCGCTACAA AAACGGCTTT AACGATTCTC TCAAATGTAT TGCTATCTGT TAAAGACGGA 
AGCCTTACTA TAAAGGCCAC CGACATAAAA GTAAGTTTTG AAACAAAAAT ACCCGTAAAC 
ATAATAGAAG AAGGCTCAAC AACTGTTTTT TGCGATAAAT TCGCAGGTAT TCTTTCATCT 
TTGCCAGCAG GCGAAGTAGA AATAGAACAA AAAGACCAAA AACTCACGAT AAAATCGGTA 
GTAAAAAAGG CAAAATTTCA ACTTAAAACA ATACCTGAAA ACGACTTTCC TGCCTTTACA 
GAACCCACAA ATGTAAACTT CTTTAATATT CCCACAAAAG AATTTAAAGA AATGATTCAT 
CAAACTATTT TTTCGGTTTC AGATGATGAA ACACGCTATT TTATGAATGG TGTTTATATC 
GAAAACAAAG AAGATACCTT ATATTTTATT GCAACCGACG GAAGGCGTCT TGCTCATATT 
AAGAAAAATT TCGGAATACC TATTCCCGAA TTTAAAGGAG TAATTGTTCC TCCTAAAATT 
TTAAACATAA TCAATAAAAG AGCATCTGAT GAAGGAAATA TAGAAGTTGG AATCGGTGAA 
AAAAACATAT TCTTTAATTT TAATTCTTAT AAATTCTCTT CTGTTTTGAT TGACGGTCAA 
TTTCCCAATT ATGAAAGAGT AATCCCTGAA AATCAGAACC TTTCTTTTGA AGTTTCAAGA 
ACGGAATTTA TAGAAGCTTT AAAACGAGTT TCTCTTTTGG TAGAATTAAA AACAAGAAGA 
ATATTTTTAA ACATTCTTCC CGGTTCTCTT ATTATTTCTT CTCAAGAAAA TGAAATAGGA 
AGTGCACGCG AAGAAATTCC TTGTAAATAC GACGGTCAAG AAGTTATGCT GGCCTTAAAC 
TATGTTTATA TAGAAGATCC TTTAAAGACC ATCACTTCAG ACAGAATAAA GGTAGAATTT 
ACCGAAGCTA TGAAAGCTAT AACATTAAAA CCTGAACCTG AAGAAGACTT TTTCCATATA 
ATAATGCCTA TGCAGACGGA GTAA 

 

Protein sequence

MKISFDRDTL LKEISIAQEI IATKTALTIL SNVLLSVKDG SLTIKATDIK VSFETKIPVN 
IIEEGSTTVF CDKFAGILSS LPAGEVEIEQ KDQKLTIKSV VKKAKFQLKT IPENDFPAFT 
EPTNVNFFNI PTKEFKEMIH QTIFSVSDDE TRYFMNGVYI ENKEDTLYFI ATDGRRLAHI 
KKNFGIPIPE FKGVIVPPKI LNIINKRASD EGNIEVGIGE KNIFFNFNSY KFSSVLIDGQ 
FPNYERVIPE NQNLSFEVSR TEFIEALKRV SLLVELKTRR IFLNILPGSL IISSQENEIG 
SAREEIPCKY DGQEVMLALN YVYIEDPLKT ITSDRIKVEF TEAMKAITLK PEPEEDFFHI 
IMPMQTE