| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0213 |
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| Symbol | |
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| ID | 2739370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 248408 |
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| End bp | 249550 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637159082 |
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| Product | TPR domain-containing protein |
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| Protein accession | NP_970829 |
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| Protein GI | 42525731 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000856086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAATC CTATCGATTC GCTTTTATAT GTAAAAATAT CGGCTGAACA AGCTGGCAAG
ATTTTTGAAA ATCTTGAGTC TTCAATTCCG CTTCCTATTC AATTATCCGA ACCCGGCCAA
AAAGAAGATT TTAAGGCCGA AAATATAAAG CCGGAAATGA TTTTAGCCGG AATGCTTACC
GTTTTTGCCT ATGACAGGGA AAATCCCCAT ATTACATATT ATCGAAAAAT ATTTAATTTA
CTCCGTCCCG ATATCCGTAA AGAAATGACT GAGGCTGCAA TTATCAAAAT CAAAAATAAT
GATTTTGATA TGGCTGAAGA GATTTTACTT TCTCTTGAAG GTTTAAATCC GGATGACGGT
ATAACCAAAT TAAACCTTGC TCTTTTGATG GAAGAGCGTT CTCAATTCTG TGAGATGAGA
GAACTTTTTG AAGATGCTTT GAGCTTTAAT AAAAGAGCCG AAGAGCTTTA TTCAGAGCTT
ATACTTTTTG AGCCTCCATT GCCGGGTGTT TTTTTTAATG CTGCATATTT TTTTATAAAA
CAGAAAAACT ATATAAAAGC CAAATCCCTT TTAAAAACAT ATTTGGAAAT AGAAAATGAT
TCTTCAGAAA CAGCCGAATT CCGAAAAGCT AAGGCTTCCG AGTTGCTTAA AACTATTTCG
GAACAAGCTC TTGACGATGA GCTTTTCCAA AAAGCCTATA AATGTATTGA TTTAGGCGAA
GAAGAAAAAG CCGCCGAAAG TATAAAGCTT TTTTTGCGAA AAAATCCTAA GGTTTGGAAT
GCTTGGTTTT TGTTGGGCTG GGCTTTAAGA CGAATGGGCC GTTGGGAAGA TGCCCGATCT
TCTTTTTTAA AAACCATTGA ACTTTTAGAA AATTCCGAAA TTTCAGACAA AGAACCTCTT
TGCGATGTTT ACAATGAGCT TGCAATTTGT TTGATGGAGT TAGAACTTTT TGATGAAGCC
GAAAAACATC TTATAAATGC CTTGAGTTTA GATTCCGAGA ACATAAAAAT TATTTCCAAT
CTTGGCACCC TCGCTCTAAA ACAGGGAAAA CAAGAAGAAG CGGAAGCCTT TTTTAGAACC
GTTTTAGAAA TAAATCCTGA CGATAAAATA GCTTTAAATG TTTTGGGTAA ACCTCGGGCA
TAA
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| Protein sequence | MQNPIDSLLY VKISAEQAGK IFENLESSIP LPIQLSEPGQ KEDFKAENIK PEMILAGMLT
VFAYDRENPH ITYYRKIFNL LRPDIRKEMT EAAIIKIKNN DFDMAEEILL SLEGLNPDDG
ITKLNLALLM EERSQFCEMR ELFEDALSFN KRAEELYSEL ILFEPPLPGV FFNAAYFFIK
QKNYIKAKSL LKTYLEIEND SSETAEFRKA KASELLKTIS EQALDDELFQ KAYKCIDLGE
EEKAAESIKL FLRKNPKVWN AWFLLGWALR RMGRWEDARS SFLKTIELLE NSEISDKEPL
CDVYNELAIC LMELELFDEA EKHLINALSL DSENIKIISN LGTLALKQGK QEEAEAFFRT
VLEINPDDKI ALNVLGKPRA
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