Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0209 |
Symbol | |
ID | 2739366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 244335 |
End bp | 245621 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637159078 |
Product | arsenical pump membrane protein, putative |
Protein accession | NP_970825 |
Protein GI | 42525727 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.144741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTACAG ATCCTCTCAT TTTAGCGGCC GTCTTATTCG GATTGACCTA TGTTTTGATG ATTACCTTGA CAAACCACAG GCCGATAGTG GCCTGTTCAT CGGCCCTAAT CTTCGTACTT TTAGGGATAC TCCCTTATAA TGAAGTTTTT TTTGCCATTG ACTGGAATGT TATTTTAATG ATTGCAGGAA CAATGGGCTT GGTTGCCCTT TTTACCGAAT CTAAAATGCC GCAACGCATT GCAGATAAGA TTATAAACAA TGTACCCGAT GTAAAATGGA TTATAGTATG TCTATCCCTC TTTGCGGGTT TTATTTCAGC CTTTATGGAT AATGTTGCCA CAGTCTTAAT GCTGGCACCC ATTGCTGTTG TATTATCGAA AAAGCTCAAC ATGTCGCCTG TTAAACCCAT AATTGCTATT TCAATTTCGG CAAACCTTCA AGGAGCAGCC ACCTTGGTAG GAGACACTAC CTCAATTCTT TTAGGAAGCC ATTTAAACAT GACCTTCTTC GACTTTTTTT GGTATTTGGG AAAACCCTCT CTTTTCTTTG CCGTCGAAAT TGCAGCTGTT GCCGCCACCG GAATTATCTA TTTTATTTTC CGAAAGGCCG TCCAGAAGCC GGATAAGGTT GAACTTACCA AGGTAACGGA TTATTTTCCT TCAATTTTGC TTATAGTAAT GGTCGTACTT ATGATTGGAG CCTCATTTTT ACCGGAGGAA AAAAAGCCCC AAACAATAAA CGGGTTAATT TGTACAGGCC TTATGATCGT AGGTATTATC TATAACATCA TAAAAACAAA AAAACTTGAT ATTTTAAAAG TCGTAAAAAA AGAACTCAGT TTTGAAACCC TCTTTTTACT TATGGGGCTT TTTACTGTTA TTGCAGCCGT TACAAGGGCC GGAGTTATAC AGGCCATTGC CGACTGGTTT TTAACCCTTG GCTCAAATGT ATTTTTAATT TACACAATAA TAGTTTGGGG TTCGGTTTTA ATTTCTGCAT TTGTAGATAA TATTCCATAT GTTGCTGCCA TGATACCTAT TATACAAATA CTTTCGGAAG GCCTTAATAT AGCTTCACCC ATTTTGTTTT TCGGACTTCT TTCAGGAGCA ACCCTCGGCG GGAACATTAC GCCCATTGGG GCTTCTGCAA ATATTACATC TCTCGGTATT TTAAGAAACG AAGGCCATCA GGTAAAAAAC AGCGAATTTA TGAAGATGAG CGTTCCTTAC ACCCTTACTG CGGTTGTAAT AGGTTATATT CTTATTTGGC TTTGTTACGG CGTGTAA
|
Protein sequence | MVTDPLILAA VLFGLTYVLM ITLTNHRPIV ACSSALIFVL LGILPYNEVF FAIDWNVILM IAGTMGLVAL FTESKMPQRI ADKIINNVPD VKWIIVCLSL FAGFISAFMD NVATVLMLAP IAVVLSKKLN MSPVKPIIAI SISANLQGAA TLVGDTTSIL LGSHLNMTFF DFFWYLGKPS LFFAVEIAAV AATGIIYFIF RKAVQKPDKV ELTKVTDYFP SILLIVMVVL MIGASFLPEE KKPQTINGLI CTGLMIVGII YNIIKTKKLD ILKVVKKELS FETLFLLMGL FTVIAAVTRA GVIQAIADWF LTLGSNVFLI YTIIVWGSVL ISAFVDNIPY VAAMIPIIQI LSEGLNIASP ILFFGLLSGA TLGGNITPIG ASANITSLGI LRNEGHQVKN SEFMKMSVPY TLTAVVIGYI LIWLCYGV
|
| |