Gene TDE0156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0156 
Symbol 
ID2741744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp180434 
End bp183661 
Gene Length3228 bp 
Protein Length1075 aa 
Translation table11 
GC content46% 
IMG OID637159026 
Productadenylate/guanylate cyclase catalytic domain-containing protein 
Protein accessionNP_970773 
Protein GI42525675 
COG category[T] Signal transduction mechanisms 
COG ID[COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000640114 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAAA AAATATTTTT AATTGCGGCA GTTATTCTGC CGGTTATGCT TCCGCTTCAG 
TCGGAAATTT CGTTTAACAA CCTTGCAGGG TCAGTGCAAA CATTTTGGTC AGATACAAAC
GGACTTCCGT CAAACAGAAT TCTTGACATT ATGCAAGATG AAACCGGTTA TATTTGGCTC
GCCTCGTATG ACGGGCTCAT CAGGTTTGAC GGGGAAGTCT TTACCGAATT TACCGAAGAG
GAACATGGAT TTACCGGCAT ATCGCCACGC GTTTTGTGTG AAGATGTACA CGGCAGCCTG
TGGGTAGGTA CGAATGCAAC CGGCTTATAC GAATACAAAA ACAAAACCTT CACCCGCTAC
GGACTGGAAG ACGGACTTCC CAACTTATCT GTCCGTGCGG TTAAATTCGA CAAGAACAAT
ACCCTTTGGG TCGGAACAGC GAACGGACTG GTATGCAAAA GCGCAAGCGG CGGTTTTATG
CCGGTTCTCA GCGAAGATGG GAGCGGACTC GGTCTTATTT CGTTTATATT GCCAGTGCAG
GATATGGTTT TTGTCGGCAC CAACCTCAAA GGCATTACGG CGATACGGGC GGGAAAGGCA
GTGCCGCTGC CGTCTTTTGC TGCGGTGCAG GATTATACTT TTTCGACGGC TTATGTGTCT
TCGGACGGCG TTATCTGGTT CGGTACTAAG GACGGCAAAA TCGTAAAAGT AAAAGGCGAT
ACAATTGCCG AAATTATCGA TTTAGAATAC CTGCGCGGTA CGAGCATAAA CGAATTTTTG
CAAACTCTGA ACGGAACATT ATATGCCGCT ACCAATAGGG GAGTCGTTAC GCTTGGAACA
GGAGACCCTG AAGCGTTTTC CGAAAGTAAC GGTCTTCCAA ATAATATTGT TTCAAGCCTG
TGCCAAGACC GCGAGAATAA TCTGTGGGTA GGGATGGAAC ACGGCGGTAT CGGCAAATTC
AGCAGAGGGA AGTTTCTCGA TCTTACAAGT GAAAAGTCGT TACCGGCTGA GGCGGCAAAT
GCCGTTATTC AGGATGCAGA TAAAAATATT TGGATTGCAA AAGACGACGG TATTGCCTGT
ATTAAAAGTT CCGGCCTTTC ATTAGAACGC AGCGGACAAA TCGATTCAGT ATCGGAAATA
CTTAAGGGCC TTCGCGTCAG ACAGGTGAGG GAAGATTCGG ACGGCTCTTT ATTTTTTGCG
ACATATTCTG ATAAAGGGCT TTTAATCTTT TCCAAAGACG GTTCGATACG CAGCATTACG
AAAAATGACG GACTTCCCAA TAATCGTATC CGCTTTTCGT ATTCCGGCAG AGACAATGTC
ATGTGGATAG GGACGACTGC ATGTCCTGCC TTGTACTATA ACGGAACGGT TACGGCATTT
ACCCGTGAAG ACGGACTGCC GAATCTGTTT ATTTTATGTG CGCTTAAAAG CTCGAACGGC
AAGCTGTGGT TGGGAACGGA CGGAGGTGGT GCGGTTGAAA TTGCTCTGTC GGGACTTGCC
GAAGGCATGC CCCGCATTCA TATTGAGCGT ATCCTTATAA AGGAAAACGG CTTAAGCGGA
AACATCGTCT TCCGTATTGT CGAAGACAGT TACGGCAATA TGTGGTTTTG TACGAGCGAA
GGGCTTACTT TATATAAAGA CGGCACGTTT TATTCTGCAG CGCAGGCAAT CGGAAGGAGC
GGCAACAGTG TATTCAATAT CTTAAACGAT GCCGAAAACA ATTTATGGAT TGTAACAGCG
AAAGAACTGC TGTTCGTTAA AAATGACGCC TTTGTGCAGG CGGTACTTAA CAAAACACCC
GCCGAAAACC TTTTTCGATA TAACCGTCTT GACGGACTGA CAGGGCAATT GGCGGCAAAC
GCATGGGCAT ACATTACCGA AGACAATATT CTTTTTATTC CGACTATCAA GGGCGTTTCC
GTCTGCGATC CGTCAGGCTA TGTTCCCAAT AAATATGAAC CGCCGGTCGT TATTGAAAAT
ATCTTTTTAG ACGGCAAGCG ATTCGACGCT GCGGAGGGGG TTCTTCAGGT TTCCGCAAGG
ATAAAGCGCA TTTTATTTAA ATTTACAGCA CTCAGCTATA CCATTCCGCA ACGTGTTCAG
TTTGAATATA AACTTGACGG TTACGATTCC GAATGGCGTT CATGCGGCAC AACACGGGAA
ATTGCGTATA CAAATTTAAA TCCGGGAAAT TACGTATTTA AAGTGCGGGC TGCGAATAAT
GACGGCATAT TGAACAGAGA CGGCTCCCGC GTTTCGTTTT ATAAACGTCC GTTTTTTTAT
CAAACAGTTT GGTTTTATCT CTCGATGGTT TTACTGGGAA GCGCACTCAT ATTCTTTGCC
GTGCAGCTCC GCTTTAGGGC ACTGCAACAC AGAGCGCAAG AATTGGACAA AAAAGTGAAA
GAAAAAACGA AAGAACTTGC CGACGAAAAA GAAAAAAGCG ACAAACTGTT AAAAAATACA
CTGCCGCTTT CGATCATCGA TGAGCTTATT AAAATGGGTG AGTCAAAGCC GAAACTCTAT
CCTGCGGTAA CGGTTTTGTT TGCCGACGTC GTAGGCTTTA CCGAATGGTC GGGACACAAC
ACCCCCGATG CGGTTATTTC GGGGTTAAAC TCGCTTTTTA CGCACTTTGA CGGTATTATG
GATTTATACG GTTGTGAGCG GATAAAAACG CTCGGTGACG GGTACCTCGC CTGTTCGGGG
CTGACGAACG AAAAAAATCA CGCGGAGCGG GTTGTGGATG CGGCAGTAGC GATGCTGCGC
AGCTTAGAAA CTTTTAACAA AGAGAACGAC AGCTGCTTCA GCATTAAAAT CGGTATATCT
TCGGGTGCAA TTACCGGCGG TATTGTAGGG GTACATAAAT ATATCTTCGA TGTGTTCGGC
GACACGGTAA ATACCGCATT TCGCCTTGAA TCGGTTACGT CTCCGACGGC GTGTACCGTT
TCCGAGTCGA CAGCGGCATT AATCCGCGGT AAATACGGGC TTCATAAGCG TCCCGACCAA
AACTTAAAAG GAAAAGGGCT GATACCATGC TACTACGTAA AATATGCTGC CTCCGACAAA
GTGTCCGATA GAGAAGAAGT GAAAGCCTTG TATGGACGGC TCGTAGCACT GTATAAAAAT
AAAGAATTCA TTGAATGCCG CTCCGTCATC GCACAGCTTG ACCGCACGCT CTTGGAACCC
GATATCGGAA GAACTATCGC TGCGGTAATA AAACATATAG GAATGTAA
 
Protein sequence
MLKKIFLIAA VILPVMLPLQ SEISFNNLAG SVQTFWSDTN GLPSNRILDI MQDETGYIWL 
ASYDGLIRFD GEVFTEFTEE EHGFTGISPR VLCEDVHGSL WVGTNATGLY EYKNKTFTRY
GLEDGLPNLS VRAVKFDKNN TLWVGTANGL VCKSASGGFM PVLSEDGSGL GLISFILPVQ
DMVFVGTNLK GITAIRAGKA VPLPSFAAVQ DYTFSTAYVS SDGVIWFGTK DGKIVKVKGD
TIAEIIDLEY LRGTSINEFL QTLNGTLYAA TNRGVVTLGT GDPEAFSESN GLPNNIVSSL
CQDRENNLWV GMEHGGIGKF SRGKFLDLTS EKSLPAEAAN AVIQDADKNI WIAKDDGIAC
IKSSGLSLER SGQIDSVSEI LKGLRVRQVR EDSDGSLFFA TYSDKGLLIF SKDGSIRSIT
KNDGLPNNRI RFSYSGRDNV MWIGTTACPA LYYNGTVTAF TREDGLPNLF ILCALKSSNG
KLWLGTDGGG AVEIALSGLA EGMPRIHIER ILIKENGLSG NIVFRIVEDS YGNMWFCTSE
GLTLYKDGTF YSAAQAIGRS GNSVFNILND AENNLWIVTA KELLFVKNDA FVQAVLNKTP
AENLFRYNRL DGLTGQLAAN AWAYITEDNI LFIPTIKGVS VCDPSGYVPN KYEPPVVIEN
IFLDGKRFDA AEGVLQVSAR IKRILFKFTA LSYTIPQRVQ FEYKLDGYDS EWRSCGTTRE
IAYTNLNPGN YVFKVRAANN DGILNRDGSR VSFYKRPFFY QTVWFYLSMV LLGSALIFFA
VQLRFRALQH RAQELDKKVK EKTKELADEK EKSDKLLKNT LPLSIIDELI KMGESKPKLY
PAVTVLFADV VGFTEWSGHN TPDAVISGLN SLFTHFDGIM DLYGCERIKT LGDGYLACSG
LTNEKNHAER VVDAAVAMLR SLETFNKEND SCFSIKIGIS SGAITGGIVG VHKYIFDVFG
DTVNTAFRLE SVTSPTACTV SESTAALIRG KYGLHKRPDQ NLKGKGLIPC YYVKYAASDK
VSDREEVKAL YGRLVALYKN KEFIECRSVI AQLDRTLLEP DIGRTIAAVI KHIGM