| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0096 |
|---|
| Symbol | |
|---|
| ID | 2741711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 112863 |
|---|
| End bp | 114197 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637158966 |
|---|
| Product | NADH oxidase |
|---|
| Protein accession | NP_970713 |
|---|
| Protein GI | 42525615 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000338417 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAA TTGTAGTGGT GGGTGCAAAT CACGCCGGAA CGTCGGCCAT TAATTTTTTA
ACTGAACTTT CAAAAGAAAA TGAAGTCGTT GTCTTTGACA GAAATACCAA TATCAGCTTT
TTAGGCTGCG GAATGGCCCT CTGGATAGGA AATCAGATCA GAGGTTCCGA AGGTCTCTTT
TATTCCAATA AGGAAAAACT GGAAGCAAAG GGTGCTAAGG TTACAATGGA AGCCGATATT
ACACGCATAG ATTTCGATAA AAAAATCGTA TACGGAACGG TAAAGGGTTC ACAGCCCATC
GAAGAATCCT ATGATAAATT AATCCTTGCA ACAGGTTCAA TTCCTATAAT GCCGAAGATT
AAGGGCATGG ACTTGGAAAA TGTTCAGCAG GTAAAGATTT TTCAAAATGC CCAAGAAGTT
ATCGACAAGC TAAAAAATCC CGATATTAAA AAAATTGCAG TTGTAGGAGC CGGATACATC
GGTGTTGAAC TTGCCGAAGC CTTTAAAAGG CATAATAAGG AAGTTGTGCT CATTGATGCA
ATGCCGTCAA GTCTTTCAAA CTATTACGAT AAGCCTTTTA CCGATTTAAT GGATAAAAAT
TTAAACGATC ACGGAATCAA ACTTGCATAT AATCAGCTCG TCCAAGAAAT CAAAGGAACA
ACAAAGGTAG AAGCCGTTGT TACGGACAAG GGAGAATATC CGGCCGACAT GGTAGTCGTC
TGTATCGGTT TTAGGCCCAA TACCGACCTT GGAAAAGATA AACTTGAAAC CTTTAAAAAC
GGAGCCTATT CGGTCAACCT AAAGCAAGAG ACAAGCATAA AAGATGTTTA CGCAATAGGA
GACTGTGCAA CAGTTTTTGA TAACTCTTTA GGAGAAAAAT CCTACATTGC CCTTGCAACA
AATGCGGTAA GAAGCGGAAT TATAGCCGCC CATAACGCAG CAGGAATTCC CTTAGAAGGC
ATAGGAGTCC AAGGTTCTAA CGGAATCAAT ATATATGACT TGAAAATGGT ATCGAGCGGC
CTTACTGTAG AGCGTGCAAA AAAGCTGGGG CTTGATGTTG AGTTTACCGA CTTTGAAGAT
TTGCAGCGTC CCGAATTTAT GGAACACGAT AATCCTCCGG TAAAATTAAG GATTGTGTAT
AACAAAAAAA CGAGGGTTAT AATCGGTGCT CAAATGGCTT CGACCTATGA TATGTCTATG
GGTATTCACA TGTTCTCCCT TGCAATCCAA GAAAAGCTTA CAATCGATAA GCTTAAACTT
TTAGACATCT TCTTTTTGCC CCACTTTAAT AAGCCGTATA ATTACATAAC CATGGCCGCC
TTGGGAGCAA AATAG
|
|---|
| Protein sequence | MSKIVVVGAN HAGTSAINFL TELSKENEVV VFDRNTNISF LGCGMALWIG NQIRGSEGLF
YSNKEKLEAK GAKVTMEADI TRIDFDKKIV YGTVKGSQPI EESYDKLILA TGSIPIMPKI
KGMDLENVQQ VKIFQNAQEV IDKLKNPDIK KIAVVGAGYI GVELAEAFKR HNKEVVLIDA
MPSSLSNYYD KPFTDLMDKN LNDHGIKLAY NQLVQEIKGT TKVEAVVTDK GEYPADMVVV
CIGFRPNTDL GKDKLETFKN GAYSVNLKQE TSIKDVYAIG DCATVFDNSL GEKSYIALAT
NAVRSGIIAA HNAAGIPLEG IGVQGSNGIN IYDLKMVSSG LTVERAKKLG LDVEFTDFED
LQRPEFMEHD NPPVKLRIVY NKKTRVIIGA QMASTYDMSM GIHMFSLAIQ EKLTIDKLKL
LDIFFLPHFN KPYNYITMAA LGAK
|
|---|
| |