| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0092 |
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| Symbol | cysS |
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| ID | 2741707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 109867 |
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| End bp | 111345 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637158962 |
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| Product | cysteinyl-tRNA synthetase |
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| Protein accession | NP_970709 |
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| Protein GI | 42525611 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0131697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTAA AATTACATAA TACCTTAGGT AATAAAAAAG AAGAATTTAT TCCCATTCAT
GAAGGCAAGG CCGGAGTTTA CGGCTGCGGG CCTACCGTAT ATGACTATGC ACATATAGGA
AACTTACGCA CCTATGTTTT TCAAGATATT CTTGTTAAGA CTTTAAGATT TTTAGGTTAT
GATGTTACCC ATGTTATGAA TATAACCGAC GTCGGGCATC TGACAGATGA CGAAGATTCG
GGTGAAGATA AGATGGTAAA ATCTGCAGAA GAACGCGGAA AATCGGTGCT TGAAATTGCA
GAATTTTATA CAAAGGCCTT TTTTAACGAT ACCGAAAGGC TGAATATCGA AAGGCCCGGT
ATTGTCTGCA AGGCTACCGA ACACATAAAT GAAATGATAG AGCTTATAAA AAGAATAGAA
GCGAACGGGC ACACCTACAT GGCCGGCGGA AACCTCTACT ATGATATTTC TACCTTTCCC
AAATACGGAG AGTTGGCAAA CATAAACCTT GAAGACCTTA AAGCCGGTGC CCGTATCGAA
ATAGATAAAA ACAAACGCAA TCCTCATGAC TTTGTTCTTT GGTTTACAAA GAGCAAGTTT
GAAAATCAGG CCCTTGTCTG GGATTCGCCT TGGGGACGAG GCTATCCCGG CTGGCATATC
GAATGTTCTG CCATGAGTAT GAAGTACCTG GGTGAACAAA TCGATATTCA CAAGGGCGGG
ATAGATCATA TAAGGGTACA TCATACCAAT GAAATAGCCC AATCCGAAGG AGCAACGGGT
AAAAAATGGG TAAATTATTG GCTTCATAAC GAATTCCTGG TTATGAATAA GGGCAAAATG
TCTAAGTCTG CAGGTTCTTT TATCATTTTG GAAGATGTTA TCAATAAGGG TTTTTCAGCT
CTTGACTACC GTTTCTTGCT TTTGGGCGGG CATTACCGAA GTCAGCTTAC CTTTTCATGG
GAAGCTATGG AAACGGCAAA AAACGGCCGA AAAAACTTAA ATAACAGAGT TGCAAAATGG
TTGGATGGAT TATCGGATTC CGAAATAATG GAGTATGCAG CCTTGACAGA AAACCTTAAC
CTTAAAAGTG CAAAAGATAT GATAAAAAAT GAAAAAGCAC GCAGTTGCTT TGATAATTTT
ATTGCCGCTA TGGAAGATGA TTTATCTACA CCAAAGGCCT TATCGGAGTT GCAGCTTTTG
ATAAAGGAAA AAGACATTCC GCAAAAGGAT GTGTTAACGG TTCTTGCCGC TATGGATTCG
ATTTTGGGCA TCAAATTGAT AGAAGAATCC TTTAATACGC TAAAGGATAA AGGTTCTATT
GAAATCGATG AATCCGAAAT TCTTAAATTA ATAGAGGAGA GAGCTTCGGC AAAACTTGAC
AAAAATTATA AACTGGCTGA TGAAATTCGG GATAAGCTAA AGGGTATGGG CATTATCCTT
GAAGACCAGG CCGGTAAAAC AACATGGAAA AAATTATAA
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| Protein sequence | MSLKLHNTLG NKKEEFIPIH EGKAGVYGCG PTVYDYAHIG NLRTYVFQDI LVKTLRFLGY
DVTHVMNITD VGHLTDDEDS GEDKMVKSAE ERGKSVLEIA EFYTKAFFND TERLNIERPG
IVCKATEHIN EMIELIKRIE ANGHTYMAGG NLYYDISTFP KYGELANINL EDLKAGARIE
IDKNKRNPHD FVLWFTKSKF ENQALVWDSP WGRGYPGWHI ECSAMSMKYL GEQIDIHKGG
IDHIRVHHTN EIAQSEGATG KKWVNYWLHN EFLVMNKGKM SKSAGSFIIL EDVINKGFSA
LDYRFLLLGG HYRSQLTFSW EAMETAKNGR KNLNNRVAKW LDGLSDSEIM EYAALTENLN
LKSAKDMIKN EKARSCFDNF IAAMEDDLST PKALSELQLL IKEKDIPQKD VLTVLAAMDS
ILGIKLIEES FNTLKDKGSI EIDESEILKL IEERASAKLD KNYKLADEIR DKLKGMGIIL
EDQAGKTTWK KL
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