Gene TDE0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0090 
Symbol 
ID2741705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp108634 
End bp109296 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content35% 
IMG OID637158960 
Producthypothetical protein 
Protein accessionNP_970707 
Protein GI42525609 
COG category[K] Transcription 
COG ID[COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTACAT GCCCTGATAA AGATTTATAT TCGGCCTATG TTGATGGAGA ATTACAGTCC 
CCATGGAAAG AAAAAATTGA AGTTCACTTG GTTTCTTGTG AAAAATGCAG GAGTGTGGTT 
GACTCATATA GAAAAATCAG TTTAAAACTA TCTGAAAATT CTTTTCCTGA GCCTGACCTT 
GACGGTTCTT TCCTTAAACT CTATGCCAAA AGGCAGGATT GCCTAAAAAA AATGGAATTC 
AACAAGAGCA AACCTACAAG CTGGTTCTAT AAATCGAATA AAATTCCTAT CCCGGCCTTA 
GCGGCGGCTG CTCTGTTTCT TTTTGTGTTG ACACCTATTA TTGTTTTGAG TACACAAGAA 
AGTTTAGAAC CATCCGGAGC TGTTGCAGCT ACCGAATTTA AAGCTATTGA TTCTATAATT 
AACGGTTTAA AACCCGTAAA TAAATTCAAG TTAAATGTTT CAAATGTTTT GGGCGTAAAT 
GAAGATGTAT CGGTTTTTGA AGGCAAAAAG AAGGAAATAA ATTTAAGCCA ATATGTAAAT 
TTATACTTGC CTCCCTCAAA TAACGCAGAA TTTGATATAT TAAAGCAAGA AATAAAGCCT 
CAAGTTTTAT TTCTTAACAC TCAAAATGCA ATAACCCGAA CTTCTGTAAA CAATGGGCAA 
TAG
 
Protein sequence
MSTCPDKDLY SAYVDGELQS PWKEKIEVHL VSCEKCRSVV DSYRKISLKL SENSFPEPDL 
DGSFLKLYAK RQDCLKKMEF NKSKPTSWFY KSNKIPIPAL AAAALFLFVL TPIIVLSTQE 
SLEPSGAVAA TEFKAIDSII NGLKPVNKFK LNVSNVLGVN EDVSVFEGKK KEINLSQYVN 
LYLPPSNNAE FDILKQEIKP QVLFLNTQNA ITRTSVNNGQ