| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0070 |
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| Symbol | |
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| ID | 2741685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 77853 |
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| End bp | 78680 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637158940 |
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| Product | sigma-70 family RNA polymerase sigma factor |
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| Protein accession | NP_970687 |
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| Protein GI | 42525589 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGGAGA ATCTGCTTTT ACAATACATT AAGGATAGCA AAAAATATCC TCTTTTATCA
GCCGAGCAAG AAGCAGAATT AGCCGATGAG GTAAAAAAAG GCAATACAGA GGCTATAGAG
GTTCTTGTTA CATCAAACTT GCGGCTTGTA ATAAAAATGG CTAAAAAGTT CAGCTCAAAT
GAAAACCAAA TTTTGGAACT CATTCAAGAA GGTAATATGG GTCTCATGAA GGCTGCTTCT
AAATTTTCAA AATCGTTTAA AGTCCGTTTT TCAAGCTATG CAGCTTGGTG GATAAAACAA
TCTTTTATAA GATACTTGAA TTCTGCCGAC AAAGTTATAA AACTTCCCGT AAGAAAAGAA
GCCTTAATCC GCCAAGTACA CAAAGAAGAA GAAAACTATA AAATAAAATA CGGAATTTTA
CCTTCTTATA GCCAGCTTGC AGAAATAATG AAAGAAAAAG TAGATATTAT CGCTCAGATA
AAATCGTTTA ATTATACAGA TATATGCAGT TTAGACGATC CTGTTGATAA CGAAAGATCG
GCAAACCTGT ATGATTTTAT TCCGTGTAAT ACCTATAACC CCGAAGAAGA GTTTATAGAT
AACGAATTCA AAGAAAAATT AAATAAGTGT TTGGAAATAC TTAATGACCG CGAAAAAGAT
GTTTTAAGAA ACCGATACGG TCTTGACGGT ACTATGACCT CGACCACCTT TGCCGTCTTA
GGAAAAAAAT ATTCAATCTC GGCTGAATCC ATCCGTCAAA CCCAGCTGAG AGCCCTAAAA
AAATTAAGAG CCGATACAAA TAAGATTAAA GCAATGGTCT CGGTATAG
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| Protein sequence | MTENLLLQYI KDSKKYPLLS AEQEAELADE VKKGNTEAIE VLVTSNLRLV IKMAKKFSSN
ENQILELIQE GNMGLMKAAS KFSKSFKVRF SSYAAWWIKQ SFIRYLNSAD KVIKLPVRKE
ALIRQVHKEE ENYKIKYGIL PSYSQLAEIM KEKVDIIAQI KSFNYTDICS LDDPVDNERS
ANLYDFIPCN TYNPEEEFID NEFKEKLNKC LEILNDREKD VLRNRYGLDG TMTSTTFAVL
GKKYSISAES IRQTQLRALK KLRADTNKIK AMVSV
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