Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0068 |
Symbol | |
ID | 2741683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 75437 |
End bp | 76672 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637158938 |
Product | diaminopimelate aminotransferase |
Protein accession | NP_970685 |
Protein GI | 42525587 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACCT TTAAAAAAAT TACCGATTTT ATTGAATCCA AAACAAACGA TATTATAGGA TTGGAAAGGC TTTTAACTTC CATTCCTGCC ATGGCTCCGG AATCCGATGG AGACGGAGAA TTAAAAAAAT GTGAAGCCCT GGAAAAATAT TTAAAAGAAG CGGGTTTTAG CAATTTTGAA CGCTTAGATG CCCCAGATGA GAGGGTTTCT TCAAAAATAC GCCCTAATCT GATTGTCACC ATTCCCGGAA AAAACGATAA GGAAAGGCTC TGGATTATGA GCCATCTGGA TGTAGTTCCG CCCGGAGACC TGTCTAAGTG GGAAAGCGAT CCTTGGACTG TAATCGAAAA GGACGGAAAA CTTATAGGCC GCGGAGTTGA AGACAACCAG CAGGGCCTTG TTTCTTCGGT TTTTGCAGCC TTGGCTTTTA TCAAATTAGG AATCACCCCC GAACATACTA TCAAGCTTTT ATTTGTGGCC GATGAAGAAG TCGGCTCCCA ATACGGCATA ATTTACCTCC TCAATAAGCA CAATCTTTTT ACAAACGATG ATTTGATTCT TGTACCAGAT GGAGGCGACC CTAAGGGAGA AACGATAGAA ATAGCCGAAA AAACCGGCCT TTGGCTAAAG GTTATTACGA AGGGCGTCCA AACCCATGCT TCAATGCCTA ACACGGGCAA AAACGCCTTT GTTGCAGCCT GCGACCTTGC CCTCCGCTTA AACGACTTAG AAAATCATTT TAACAAAAAA GACGATTTAT TTTCGCCTAA TTATTCAACC TTTCAGCCGA CTAAAAAAGA AGCCAATGTA CCGAATGTAA ACACAATTCC GGGAGACGAT GTTTTTTATG TAGACTGCCG AATTCTTCCT TCTTACGATG TAAACGAAGT CCTAAAAGAA ATGCAAAAAA GAGCTTCAGA GGTTGAAAAA AAGTATGGAG TGGGTATCAG ATTTGAATAT GATGAACCTG AGGCCTCTCC TGCAACACCT AAGGATGCGA AGATTGTAAG CCTTCTTTCA TCTGCCGTAA AAAAGGTAAA AGGAATTGAA ACCTCTACGA TAGGAATAGG AGGCGGAACG GTCGCTGCCT GTCTGCGCTC TAAGGGCTTT AATGCCGTTG TTTGGAGCTC CCTTGATGAC AGCTGCCACC AGCCCAACGA ATATGCTTTT ATAAAGAATA TCATAAGCGA TGCAAAGGTT ATGGCAGCTA TGATGTTCGG TGTCGAAAAT ATTTAA
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Protein sequence | MSTFKKITDF IESKTNDIIG LERLLTSIPA MAPESDGDGE LKKCEALEKY LKEAGFSNFE RLDAPDERVS SKIRPNLIVT IPGKNDKERL WIMSHLDVVP PGDLSKWESD PWTVIEKDGK LIGRGVEDNQ QGLVSSVFAA LAFIKLGITP EHTIKLLFVA DEEVGSQYGI IYLLNKHNLF TNDDLILVPD GGDPKGETIE IAEKTGLWLK VITKGVQTHA SMPNTGKNAF VAACDLALRL NDLENHFNKK DDLFSPNYST FQPTKKEANV PNVNTIPGDD VFYVDCRILP SYDVNEVLKE MQKRASEVEK KYGVGIRFEY DEPEASPATP KDAKIVSLLS SAVKKVKGIE TSTIGIGGGT VAACLRSKGF NAVVWSSLDD SCHQPNEYAF IKNIISDAKV MAAMMFGVEN I
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