Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0057 |
Symbol | miaA-1 |
ID | 2741672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 66075 |
End bp | 67061 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637158927 |
Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
Protein accession | NP_970674 |
Protein GI | 42525576 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTCCCG TATTGATTTT TTTCGGAGCG ACGGCTTCGG GAAAAACAAG CTTAGCTTCC GAAATATTTT CTTATAAACA TTCAAAAGAT TTCTCAAAAG AAGGCGGAAT TTCGGCTCTT TCAGCTTGTG CAGAAATTAT AAGCGCCGAC TCGGTTCAGG TGTATAAGCA TATGCATATC GGCTCGGCTT CTCCTTCCAA AGAAGAATTG GAAGACCTAC CCCACCACTT AATCGCCATA AAAGAGCCTT CCGAAGAATT TTCGGCAGCC GATTTTGTAA AAGAAGCCGA TAAACTTTGC CCCGAAATAT ATAGGCGGGG AAAACTTCCG GTCTTGATGG GAGGCACGGC TTTTTTCTTA AAGAATTTTC TATACGGCCT TCCCGTTACG CCCACCGCCG ACCCTAAAAT CCGTGAGCAT TTTCAAAAAC GAGCAAAGGA AGAAGGAGCC GGCATTCTTT TGGAAGAGCT AAAAAAAATA GACCCCGAGA CGGCAGAGAG GCTCCATGTT CATGACGAAT ACAGAATAAT AAGAGCTCAC GAAGTTTTTG CCGCTTCAGG GAAGCCTTTA AGCTCTTTTG CCCTCCCCGA AAACCCAAGA GAAAAATACG AGTTTTTTAT CTTAAGCATC GAAAGAACCC GCTCCCTTTT ATACGAAAGA ATCGAAAAGA GGGTCGATGC TATGTTTGCC GAGGGCCTAT ATGATGAAGT AAAAAAGCTT TATGAGATGG GCTATACAAG CGAAAGCCCC GGACTTAAAG CCATAGGCTA CAGGGAATTT TTTGATGAAA ATAAGCGTTT AAAACCCGAA TCGGACTTGG AGGAAGTCTC GGCCCTTATA AAACGAAATA CCAAACACTA CGCCAAGCGT CAAGAAACCT TTTTTAAAAC AATCCCGGAT GTTCACCGCT ATTTTATAGA AGATAAGGCT GAGATATCAA GGCTTTATAA GGATATTTGC GGGTTTTATA AAAAACTATT AAAATGA
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Protein sequence | MVPVLIFFGA TASGKTSLAS EIFSYKHSKD FSKEGGISAL SACAEIISAD SVQVYKHMHI GSASPSKEEL EDLPHHLIAI KEPSEEFSAA DFVKEADKLC PEIYRRGKLP VLMGGTAFFL KNFLYGLPVT PTADPKIREH FQKRAKEEGA GILLEELKKI DPETAERLHV HDEYRIIRAH EVFAASGKPL SSFALPENPR EKYEFFILSI ERTRSLLYER IEKRVDAMFA EGLYDEVKKL YEMGYTSESP GLKAIGYREF FDENKRLKPE SDLEEVSALI KRNTKHYAKR QETFFKTIPD VHRYFIEDKA EISRLYKDIC GFYKKLLK
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