| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0053 |
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| Symbol | fliR |
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| ID | 2741668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 61733 |
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| End bp | 62527 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637158923 |
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| Product | flagellar biosynthetic protein FliR |
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| Protein accession | NP_970670 |
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| Protein GI | 42525572 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGCCCT TCGATTTTAT CCTAGATAAA GAACCCATTT TTTTACTCGC AGCTGTCCGC
ATTTTTGCCA TACTGATGAC ATCCCCTCTA ATGTCAATGC GCAATGTTTC ACGAATTGCA
AAGGTTGCTC TTGCAGGCTT AACTGCATTT ATGGTAACCC CCTATGCCTA TCCCAACTTC
GGAAATCTAA ACGCCTTCAG TCTTGAGTAT CTTCTTTTAC TTCTTGGAGA AGGACTTATC
GGTGTTTTAA CCGGTTTTTT TATAAGCATT TTATTTTCTA CATTCAGCAC GGCAGGACAG
TTTTTTTCGT TCCAGATGGG CTTCGGGGCG TCGGGTGTTT TTGATGCCCT AGCTCAAGTT
GAAAACCCCC TCGTAGGTCA ATATTTTAAC TTTATTGCAG TCCTTATCTT TTTACGCATA
AACGGTTTCC AACGTCTTTT TTTAGGCGGA ATAATGAAGA GCATTGAGCA TGTAAACTGC
TTTTTGTTTT TAGAAAGGCA GGAGGAGCTT TCAACTTATC TTTTAGGAGC AGTTGGAAAT
CTTTTTTTAA ACGCAATGAT AATTGCCCTG CCTGTTATGG GAACACTAAT CTTAATTCAC
ATAACAATGG GACTTTTAAC AAAGGCAGCC CCTCAGATGA ATTTGTTATC GGAAGGCTTC
CCCATTACTA TTTTAACTGC CTTTTTTATT TTAGCCCTTG CTCTGCCTTT TTTTATAAAC
ACCTTTGAAA TTATTTTGGA AAAAGGCTTT TCGGATTTCT GGCGGCTTTT AGACAGTTTA
GGGGGTACTA AATGA
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| Protein sequence | MQPFDFILDK EPIFLLAAVR IFAILMTSPL MSMRNVSRIA KVALAGLTAF MVTPYAYPNF
GNLNAFSLEY LLLLLGEGLI GVLTGFFISI LFSTFSTAGQ FFSFQMGFGA SGVFDALAQV
ENPLVGQYFN FIAVLIFLRI NGFQRLFLGG IMKSIEHVNC FLFLERQEEL STYLLGAVGN
LFLNAMIIAL PVMGTLILIH ITMGLLTKAA PQMNLLSEGF PITILTAFFI LALALPFFIN
TFEIILEKGF SDFWRLLDSL GGTK
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