| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0037 |
|---|
| Symbol | |
|---|
| ID | 2741652 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 42641 |
|---|
| End bp | 42889 |
|---|
| Gene Length | 249 bp |
|---|
| Protein Length | 82 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637158907 |
|---|
| Product | AbrB family transcriptional regulator |
|---|
| Protein accession | NP_970654 |
|---|
| Protein GI | 42525556 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000106166 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTTG CAAAACTAAC ATCTAAGGGT CAGATTACAA TTCCGCTTGC GATAAGAAAT
ATGCTCGGAT TAAAAACCGG CGATAAAGTC TTTTTTGAAG AAAGCAGAGG AAAAGTTTAT
ATTACAAATG CTTCTCAAAT AACTTTAGCA AATATTCAGA CTCAAATGCA AGGAGAAGCA
GAAAAAGCCG GCTTTCAAAC AGAAGATGAC GTTATTGCTT ATATTAAAGA GCTAAGGAAA
AAGAGTTGA
|
|---|
| Protein sequence | MELAKLTSKG QITIPLAIRN MLGLKTGDKV FFEESRGKVY ITNASQITLA NIQTQMQGEA
EKAGFQTEDD VIAYIKELRK KS
|
|---|
| |