| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0029 |
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| Symbol | |
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| ID | 2741644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 36034 |
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| End bp | 37812 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637158899 |
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| Product | ABC transporter ATP-binding protein |
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| Protein accession | NP_970646 |
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| Protein GI | 42525548 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0444277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC GAGGTATTTT ACGGAATTGG GGCTATCTAT TAAAAAACAT AGCCGAAACC
GACAAGCTAT TATTTTTACT TATATTTGCT TGTGTACCGA TTGCAATACT TATGCCTTAC
CTGCAAGCTT TTTTACCGAG GGCTGTAATC GAGGGTTTAC AAAATAAAAC GGAGCTTCAA
TCCTATCTGC TAAAAATTCT TTTAATAGCA ATGGCTCTTG CCGTTACAGT GCTTTTAGAA
CAAACCGTAA AATGGCTGCT CGAAATGAAG GGGCAAGACC AAAGAGGAAG GTTCTCAAAA
GAACTCCGTA AACACGCAAT AAAGGTTGAC TATGAAAAAA TGGCAGCAGT TTCCTTTGCT
CAAAGCTTCG ACCTTTCAAT AGAAGCAATT GCCGGAGATA TAGCTATTAC AGGACAGTCT
GCAAATATAA CCGCAAATTT TTTAACAAGT CTTTTAGGTA TAATTGCATT TGCTCCATTA
ATCATCAATA TACAACCTAT TTTAATTTTA ATCATCTTTA TTTCATTTTT GACAAATTAT
TTCTATGGAA TTTTTCTAAC AAATTATGAT GAAAAGATAA CCGAACAAAA TAAGGGAGTA
AACCGTAAGC TGCACTACAT TGCTTATAAG AGTATCAATT ATAAATATGC AAAAGATATA
AGACTATATA AAATGTCCGA TTGGTTTTTT AAAAGCTACC AAACCTACAA CAACGAAAGA
AGAAGATGGG AGCGGAAATT AAGCGGCAAG CGTTTTTTAG GGGACTTAAT CGCAGGCCTT
TTTGTATTTA TTAGAGACGG CCTTGCATAC TTTTATCTTA TTACTCAAAT ATTTACAGGA
AAAATCGGAA TAGCTCAATT TGTCTTCTTG TTCCCTATTA TTACAAGTTT TTCGGATTGG
CTTATTTCCC TTTCCACTCA AATAACCGAA TTGCGTACAG GCAGTTTAAA ACTGGATTAT
CTTCGCAATT TTTTTGACAC ATGTAATGAT AACCGTAAAA GCAAGGGCGC CCCGCTGCCG
GTTTCTTTTA ATATAGAATT AAAAAATGTT TCTTATAAAT ATCCTGAATC GGATAAGCTT
ATTTTAAAAG ATATTAACTT GAATATTAAA CAAAACGAAA AAATTGCCAT AGTCGGAGTA
AACGGAGCCG GAAAAACAAC CCTCATCAAT TTGATTATGA ATTTATTTTT CCCGACTCAA
GGAGATGTTT TTATAGGAGG AAAAAATACA AAGAACTATT CCCAAGATGA ACTTCTTCCG
ATTTTTGGAG CGGTTTTTCA AGAAACATTT ATACCTCCTG AAACAATTAA AAATATTATA
TGTGCTTCTT CCGATTCACA TGATGAAATG AAGTTTCAAA AAGCCGTAAA AGACTCCGGT
TTTGAAAAAA CTATTTTAGA ACTTCCTCAA AAAGAAAATA CTTATTTGGT AAAAAGCACA
AGAAAAGAAG CCGTCGATTT ATCGGGGGGA CAAAACCAGC GGTTAATGCT TGCCCGAGTT
TTATATAGGG ATGCTCCCAT CCTTATTTTG GATGAGCCTA CTGCAGCCCT AGACCCGATA
GCCGAAAGTG AAATATACGA GCATTACAAT AAAATGACTC AAAACAAAAC TTCAATCTTT
ATTTCGCACA GACTGGCTTC CACAAGATTT TGTGATAGGA TTATTTTAAT AGAAGACGGA
AAGATTATTG AAGAGGGAAC CCATGAAAGC CTTATGGCTA AGGGCTGCAA GTATGCCGAA
ATGTTTAATA TACAGTCAAC ATATTATACG GAAAAATAA
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| Protein sequence | MKKRGILRNW GYLLKNIAET DKLLFLLIFA CVPIAILMPY LQAFLPRAVI EGLQNKTELQ
SYLLKILLIA MALAVTVLLE QTVKWLLEMK GQDQRGRFSK ELRKHAIKVD YEKMAAVSFA
QSFDLSIEAI AGDIAITGQS ANITANFLTS LLGIIAFAPL IINIQPILIL IIFISFLTNY
FYGIFLTNYD EKITEQNKGV NRKLHYIAYK SINYKYAKDI RLYKMSDWFF KSYQTYNNER
RRWERKLSGK RFLGDLIAGL FVFIRDGLAY FYLITQIFTG KIGIAQFVFL FPIITSFSDW
LISLSTQITE LRTGSLKLDY LRNFFDTCND NRKSKGAPLP VSFNIELKNV SYKYPESDKL
ILKDINLNIK QNEKIAIVGV NGAGKTTLIN LIMNLFFPTQ GDVFIGGKNT KNYSQDELLP
IFGAVFQETF IPPETIKNII CASSDSHDEM KFQKAVKDSG FEKTILELPQ KENTYLVKST
RKEAVDLSGG QNQRLMLARV LYRDAPILIL DEPTAALDPI AESEIYEHYN KMTQNKTSIF
ISHRLASTRF CDRIILIEDG KIIEEGTHES LMAKGCKYAE MFNIQSTYYT EK
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