Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0024 |
Symbol | |
ID | 2741639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 29509 |
End bp | 31182 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637158893 |
Product | glycosy hydrolase family protein |
Protein accession | NP_970641 |
Protein GI | 42525543 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCG AATTCTCACT TGCAAAAAAG AGCATACTAT TTTTTTTATG TATTTTTTTA TTGGCGGTCG ATTTGAACTC CGTTTCTTCC GTAAAACGAT TACCCAACTT TTACGATAAT GTACCGAACG AAGAACTGGC CGCCGAAATA ATTGAGAACA TGACCGATGA GGAACTTTTG GCTCAAACCT TTATGTTCGG CTGGGCAGGC CAAGATCCCG GGGACTTACT TTTGTCATGG ATTCAAGACT CCGGATTGGG CAGTATAAAA GTTTTCGGCT GGAATACCGG CGATTCCCGC AAACTTGCAA AATCCATTTC CATTTTACAA AAAAAATCCC TCGAAGGAAG ATTCGGTATT CCGCTTTTTG TTGCAACCGA TCAAGAAGGA GGCTGGGTTC GGCATGTAAA GGGTCTGACC TCTGAAACTC CCGGAAATCT TGCAATAGGA GCATCGGGCA TACCTCAAGA TTCTTACTAT TCCGGCTATT ATATTTCAAG AGAAATAAGG GCGCTAGGTA TAAACTTAAA CTTTGCTCCC ACTGTAGACC TTTTAACGGA CCATGACTCG TCAATAATAG GCCCACGCTC CTTTGGGGAC TCCCCTCATG CTGTAGGAAT ATTGGGAGCC GCCTTTGTAC GGGGAAGCAG GGATGCAGGC GTTCTTACAA CGGCAAAACA TTTTCCGGGT CATGGAGATA CCAGCATTGA CAGTCACGGC CGTCTGCCTA AAATCGACAT ATCCGAAGAA ACCTTCCGCA ACAGGGAATT GATTCCCTTT AAATATCTGA TAGATGCCGG CGTACCTGCA ATTATGACAG GACACTTAAA CTTTTCATCA ATCTTACCTA ATGGAGAGCC TGCAACATTT TCCAAATATC TTTTAACGGA TATACTGCGC GGAGAACTGG GGTTTAAAGG ACTTATAATT ACCGATGACA TGATGATGCA TGGGGCTATG AATTTTGCAG GGGGTATTGC AAAGGCTGTT AAAATGGCCT TAGAAGCCGG AAACGATATA ATCGAATCTT CCACAACGCC TCGGCACTAT CAAGCTTTTT GGAAGGATAA TATCAGGGCA ATGAAGGAGG AACCTCAATT TAAAGAAAGG GTAAAGGATG CGGCCTTTAG AATTTTACTT GAAAAATTGA AGTATTTTAA AAGCGATAAC TATGTTCCCA TTCTGCCCGA TATGGAAAAA CTGGATGAAA GAATTCCCGA TAAGGAAGGC CAAAAGTTCT TTTTGAGTTT GGCCGGCCGC GCCACTACAA TAGTGCGTGC TGTCGATATC CCTTTTAAGC CTGAAGAAAA TGAGGATATC CTTCTTGTAT CTGCCTATAA AGATTTTTTT AAATACGGCT TAAAGCGTTT CCCCAAGGCA AAAATAATTG AAGTAGACTC GGCCTATTAC CACGTACGGA ACTTTGATAC AATTATCTTT TGTCTTTCCG ATAAATATTC TTTAGGCGTT TTGCAAAAAA TAATGTACTC CTATCCTAAG AAAAAATACA TAGTTATCTC GGTTTTATCT CCTGCATTTT TGGTAAAGGT CCCTAAAGTC CAAACGGCAA TAGCCATTTA CAGTTATTCG CCGGCATCCT TTACTGCTGC ATTCGGAGCT CTTTGCGGAG ACTTCATCCC TAACGGAAAA CTTCCTATTT CAGGAATAGA GTAA
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Protein sequence | MKIEFSLAKK SILFFLCIFL LAVDLNSVSS VKRLPNFYDN VPNEELAAEI IENMTDEELL AQTFMFGWAG QDPGDLLLSW IQDSGLGSIK VFGWNTGDSR KLAKSISILQ KKSLEGRFGI PLFVATDQEG GWVRHVKGLT SETPGNLAIG ASGIPQDSYY SGYYISREIR ALGINLNFAP TVDLLTDHDS SIIGPRSFGD SPHAVGILGA AFVRGSRDAG VLTTAKHFPG HGDTSIDSHG RLPKIDISEE TFRNRELIPF KYLIDAGVPA IMTGHLNFSS ILPNGEPATF SKYLLTDILR GELGFKGLII TDDMMMHGAM NFAGGIAKAV KMALEAGNDI IESSTTPRHY QAFWKDNIRA MKEEPQFKER VKDAAFRILL EKLKYFKSDN YVPILPDMEK LDERIPDKEG QKFFLSLAGR ATTIVRAVDI PFKPEENEDI LLVSAYKDFF KYGLKRFPKA KIIEVDSAYY HVRNFDTIIF CLSDKYSLGV LQKIMYSYPK KKYIVISVLS PAFLVKVPKV QTAIAIYSYS PASFTAAFGA LCGDFIPNGK LPISGIE
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