Gene TDE0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0021 
Symbol 
ID2741636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp26954 
End bp27955 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content34% 
IMG OID637158890 
ProductCDP-alcohol phosphatidyltransferase family protein 
Protein accessionNP_970638 
Protein GI42525540 
COG category[I] Lipid transport and metabolism 
COG ID[COG5050] sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATT ACTCCTACAG TGCAGAGGAT AGATCATTGC TGAGCCCTCT GGTTTACAGA 
TATTTTGTGT TTCCTCTTAT AAAAATTTTA CCCGAATCAA TTCCGGCAAA CATAATAACT
ATCTTTTCCA ATAGCTTTGT TGTGCTTTCA TTCGTTGTCG CTTATCTAAA TTATCTTCAT
GATACTTATA GATTTTTGTG GTTGATTCCT ATTTTTTGCT GGATTTATAT TGTAGGAGAC
TGTTCGGATG GAGTACAGGC AAGACGTACA AAAACCGGTT CCCCGCTCGG CGAATACTTT
GATCATTTTT TAGACAGTTT TGTTACGGGG CTTCTTACCG GCATTTTAAT GCTTTGTTTT
CGGGTTACAA ACCCTATTTT ACTTTTTTGC GTATATCAGT TTTTATATTT GGGACAAATA
GGAACATTTT GGGGACGTTT TAAAGACGGG GTTATGCATT TTTCAAGCAT TAGTACGAGT
GAAGGAACGA TGGTCATTGC AATTATGGCT GCCCTTGCGT CTTTTTCTTT TATGAGAGAG
AGCAGTTTAA AAAATATTTT TTTTACGTTT AGTATTCCAT ACATAATTAT GTTTATGGGT
TTTGGAGCAG CTTGGCTTAC AGGTCTTATA GCTATTTTTA AGACAAAAAA AATAAGCATC
CGCTTAGTTT TACATCTTTT CTTTTCTGCC CTCATAGGCG CCGTTTTAGT TTGGAAAGTA
CAGGCACCGA TATTTGTGCA AACAGTAATT ATTACATTTT ATAATGTTCT GTTTATCCAA
TCGGTTTTAT CGGCTACGGC AGAAAAAGTA AAAGAATCAT TCCCCGACTT TTTGGTTCCT
ATCAGCTGTA TTCTATATTT TGTAGCATTT GAATATTTTA TGATTATTCA AGTTATACAA
ATTGTTTATC TTTTAGTTAG AATAATCATA AGGTTTCTTA TTTTCTTTAA GAAATATACG
GATTGTTGGT ATTGGAAAAA TCCTATTCCT TCAAAAAAGT AA
 
Protein sequence
MENYSYSAED RSLLSPLVYR YFVFPLIKIL PESIPANIIT IFSNSFVVLS FVVAYLNYLH 
DTYRFLWLIP IFCWIYIVGD CSDGVQARRT KTGSPLGEYF DHFLDSFVTG LLTGILMLCF
RVTNPILLFC VYQFLYLGQI GTFWGRFKDG VMHFSSISTS EGTMVIAIMA ALASFSFMRE
SSLKNIFFTF SIPYIIMFMG FGAAWLTGLI AIFKTKKISI RLVLHLFFSA LIGAVLVWKV
QAPIFVQTVI ITFYNVLFIQ SVLSATAEKV KESFPDFLVP ISCILYFVAF EYFMIIQVIQ
IVYLLVRIII RFLIFFKKYT DCWYWKNPIP SKK