| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0020 |
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| Symbol | glyS |
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| ID | 2741635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 25586 |
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| End bp | 26941 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637158889 |
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| Product | glycyl-tRNA synthetase |
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| Protein accession | NP_970637 |
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| Protein GI | 42525539 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0423] Glycyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00389] glycyl-tRNA synthetase, dimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.485977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAGATC ATAAAATTTC AATGGAAAAA ATTGTAAGTC TTTGTAAAAG AAGAGGTTTT
GTTTTTCAGT CATCCGAAAT TTACGGAGGC CAGAACGGGG CATGGGATTA CGGCCCCTTA
GGGATAGAGT TAAAAAATAA TGTTTCCCGC GCTTGGTGGA AGGAAATGAC CCAGCTTCAT
GATAATATAG TAGGACTTGA CGCCGCAATT TTGATGCATC CCCGCACATG GGAGGCTTCA
GGTCATGTTG AAAATTTTAC CGATCCTCTT GTAGACTGCA AAAAATGTAA ATCCCGCTTT
AGAGCAGACC ATTTACCTCC TGAAAACCTT GAAAAAAGAG TTTGCCCCGA TTGCGGAGGC
GAGCTTACCG ATACTCGTAA ATTCAACCTT ATGTTTAAAA CTCACATCGG TCCCACAGAC
GATAATTCAA GCGTTATCTA TCTCCGCCCC GAAACTGCCC AAGGTATTTA TGTAAACTAT
AAAAATATTA TTCAATCAAA CAGGATGAAG ATTCCCTTCG GTATTGCTCA AATCGGAAAG
GCTTTTAGAA ACGAAATTGT TACAAAAAAC TTTATTTTTA GAACCTGCGA ATTTGAACAG
ATGGAGATGC AGTTTTTTGT AAAACCCGGA ACTGATGACG AGTGGTTCGA CTATTGGAAA
AAACAGCGCT GGGCATTCTA TGAAAAGTAT GGGGTAAGAA CAAATAAGCT CCAATGGCAT
CAGCACGGTA AGGATGAACT TGCTCATTAT GCAAAAGATG CTTATGATAT CGAATACGAA
TTCCCGATGG GCTTTAAGGA GCTTGAAGGT GTACATAACC GTACTAACTA TGACCTTACA
CGTCATACCG AGTATTCAGG CAAAGACATG CAATACATCG ATCAAGATAA CGGAAACGAA
AAATATATTC CGTACATAAT TGAAACTTCA GCAGGCTTAA CGCGAAATGT TCTTATGTTT
ATTTGTGATG CCTATGATGA AGAAAAGGTT GCCGATAAGG GAAATGATGA TGATTGGAGA
ACCGTATTAC GCTTCCATCC TAATATTGCT CCTATAACCG TTGCTGTTCT TCCCTTGATG
AAAAAAGACG GACTTGCAGA ATTGGCCGAA GAAATTAGAA ATGAGCTTAA AGAGGAATTT
AAAACCGATT ATGACCAGTC AGGAGCTATC GGAAAAAGAT ACCGCCGCCA AGATGAGGTC
GGAACTCCTT TTTGCGTAAC AGTAGATTAT GATTCAAAAG AGGATAATAC GGTTACATTG
CGATTTAGGG ATTCTATGGA GCAAGTTAGA ATTCCCAGAA CGGAATTAAT TTCACGAATA
AAAACCGAAA TTAAAAACTA TAAAAGGGCA CATTAA
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| Protein sequence | MEDHKISMEK IVSLCKRRGF VFQSSEIYGG QNGAWDYGPL GIELKNNVSR AWWKEMTQLH
DNIVGLDAAI LMHPRTWEAS GHVENFTDPL VDCKKCKSRF RADHLPPENL EKRVCPDCGG
ELTDTRKFNL MFKTHIGPTD DNSSVIYLRP ETAQGIYVNY KNIIQSNRMK IPFGIAQIGK
AFRNEIVTKN FIFRTCEFEQ MEMQFFVKPG TDDEWFDYWK KQRWAFYEKY GVRTNKLQWH
QHGKDELAHY AKDAYDIEYE FPMGFKELEG VHNRTNYDLT RHTEYSGKDM QYIDQDNGNE
KYIPYIIETS AGLTRNVLMF ICDAYDEEKV ADKGNDDDWR TVLRFHPNIA PITVAVLPLM
KKDGLAELAE EIRNELKEEF KTDYDQSGAI GKRYRRQDEV GTPFCVTVDY DSKEDNTVTL
RFRDSMEQVR IPRTELISRI KTEIKNYKRA H
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